RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 IER2Q9BTL4 223 aa14.55□□□□□ -0.08
NIPAL3-202ENST00000339255 TMEM109Q9BVC6 243 aa14.55□□□□□ -0.08
NIPAL3-202ENST00000339255 ROPN1BQ9BZX4 212 aaPredicted RBP14.55□□□□□ -0.08
NIPAL3-202ENST00000339255 MKRN2Q9H000 416 aaKnown RBP14.55□□□□□ -0.08
NIPAL3-202ENST00000339255 ROPN1Q9HAT0 212 aaPredicted RBP14.55□□□□□ -0.08
NIPAL3-202ENST00000339255 POLMQ9NP87 494 aaPredicted RBP14.55□□□□□ -0.08
NIPAL3-202ENST00000339255 PPANQ9NQ55 473 aaKnown RBP14.55□□□□□ -0.08
NIPAL3-202ENST00000339255 RAD18Q9NS91 495 aa14.55□□□□□ -0.08
NIPAL3-202ENST00000339255 POLR3BQ9NW08 1133 aaPredicted RBP14.55□□□□□ -0.08
NIPAL3-202ENST00000339255 NSMCE4AQ9NXX6 385 aa14.55□□□□□ -0.08
NIPAL3-202ENST00000339255 ZFATQ9P243 1243 aa14.55□□□□□ -0.08
NIPAL3-202ENST00000339255 TRPM6Q9BX84 2022 aa14.55□□□□□ -0.08
NIPAL3-202ENST00000339255 BDP1A6H8Y1 2624 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 PLXNA2O75051 1894 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 FAM159BA6NKW6 160 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 H7C0S8 307 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 PSMD11O00231 422 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 AURKAO14965 403 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 AREL1O15033 823 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 MID1O15344 667 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 AP1G1O43747 822 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 VAPBO95292 243 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 P2RY2P41231 377 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 RPS9P46781 194 aaKnown RBP14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 CDKN3Q16667 212 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 KBTBD12Q3ZCT8 623 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 UBAP2Q5T6F2 1119 aaKnown RBP14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 ESRP1Q6NXG1 681 aaKnown RBP14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 TRMT10BQ6PF06 316 aaKnown RBP14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 CES3Q6UWW8 571 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 Q6ZS52 159 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 KCNMB4Q86W47 210 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 PJA1Q8NG27 643 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 OR4K2Q8NGD2 314 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 CLDN23Q96B33 292 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 DNAJC1Q96KC8 554 aaKnown RBP14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 ZIM3Q96PE6 472 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 CDH19Q9H159 772 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 C20orf96Q9NUD7 363 aaPredicted RBP14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 IL17CQ9P0M4 197 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 VPS18Q9P253 973 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 SLC2A6Q9UGQ3 507 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 SLC24A2Q9UI40 661 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 NFS1Q9Y697 457 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 IKBKGQ9Y6K9 419 aa14.54□□□□□ -0.08
NIPAL3-202ENST00000339255 GOLGA6L10A6NI86 522 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 SLC4A1P02730 911 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 COL9A1P20849 921 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 LHCGRP22888 699 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 ARNTP27540 789 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 ARCN1P48444 511 aaKnown RBP14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 METAP1P53582 386 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 ZXDAP98168 799 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 CNTN1Q12860 1018 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 ILF2Q12905 390 aaKnown RBP14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 RASA2Q15283 850 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 PIP5KL1Q5T9C9 394 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 AFTPHQ6ULP2 937 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 USP30Q70CQ3 517 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 KBTBD6Q86V97 674 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 RASSF3Q86WH2 238 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 CNTN4Q8IWV2 1026 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 CBARPQ8N350 705 aaPredicted RBP14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 RIBC1Q8N443 379 aaPredicted RBP14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 UHMK1Q8TAS1 419 aaKnown RBP14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 SCG3Q8WXD2 468 aaKnown RBP14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 FAM131CQ96AQ9 280 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 SIPA1Q96FS4 1042 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 SMIM14Q96QK8 99 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 OMDQ99983 421 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 FOXQ1Q9C009 403 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 MFSD1Q9H3U5 465 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 CD320Q9NPF0 282 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 APPL1Q9UKG1 709 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 FZD4Q9ULV1 537 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 KCTD3Q9Y597 815 aa14.53□□□□□ -0.08
NIPAL3-202ENST00000339255 CCDC78A2IDD5 438 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 RGSL1A5PLK6 1076 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 NEMP1O14524 444 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 RASGRF2O14827 1237 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 TSPAN6O43657 245 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 CDH16O75309 829 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 CLDN7O95471 211 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 C1QAP02745 245 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 SHBGP04278 402 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 ELFN1P0C7U0 828 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 DRD3P35462 400 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 MAGEA9P43362 315 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 STC1P52823 247 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 ZNF844Q08AG5 666 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 SIGLEC14Q08ET2 396 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 FZD5Q13467 585 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 THOC5Q13769 683 aaKnown RBP14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 LRRC73Q5JTD7 316 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 AGBL4Q5VU57 503 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 KIAA0408Q6ZU52 694 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 MARK2Q7KZI7 788 aaKnown RBP14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 TSPAN33Q86UF1 283 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 TDRPQ86YL5 185 aa14.52□□□□□ -0.08
NIPAL3-202ENST00000339255 CTAGE3PQ8IX95 158 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms