RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 LMNTD2Q8IXW0 634 aa22.44■■□□□ 1.18
PDLIM2-203ENST00000339162 GPR150Q8NGU9 434 aa22.44■■□□□ 1.18
PDLIM2-203ENST00000339162 EID2BQ96D98 161 aa22.44■■□□□ 1.18
PDLIM2-203ENST00000339162 PRR11Q96HE9 360 aaPredicted RBP22.44■■□□□ 1.18
PDLIM2-203ENST00000339162 LRRC3BQ96PB8 259 aa22.44■■□□□ 1.18
PDLIM2-203ENST00000339162 ECT2Q9H8V3 914 aa22.44■■□□□ 1.18
PDLIM2-203ENST00000339162 IGSF5Q9NSI5 407 aa22.44■■□□□ 1.18
PDLIM2-203ENST00000339162 UBA6A0AVT1 1052 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 GPR39O43194 453 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 PGLSO95336 258 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 PENKP01210 267 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 CCDC166P0CW27 439 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 COL6A2P12110 1019 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 STC1P52823 247 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 BCL2L1Q07817 233 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 ACCSLQ4AC99 568 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 TMEM207Q6UWW9 146 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 GALNT7Q86SF2 657 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 SDCCAG8Q86SQ7 713 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 TTC30BQ8N4P2 665 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 GBP7Q8N8V2 638 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 TTC8Q8TAM2 541 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 PIH1D2Q8WWB5 315 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 PNPOQ9NVS9 261 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 OXSMQ9NWU1 459 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 ZDHHC7Q9NXF8 308 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 GBF1Q92538 1859 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 A0A087X1B8 175 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 A8MX80 341 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 STX7O15400 261 aaKnown RBP22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 TRIM13O60858 407 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 GRK2P25098 689 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 WEE1P30291 646 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 ABCE1P61221 599 aaKnown RBP22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 ZYG11AQ6WRX3 759 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 LYSMD3Q7Z3D4 306 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 CCDC91Q7Z6B0 441 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 ADGRG2Q8IZP9 1017 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 OR6Y1Q8NGX8 325 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 SMG7Q92540 1137 aaKnown RBP22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 SLCO3A1Q9UIG8 710 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 TRIM33Q9UPN9 1127 aa22.43■■□□□ 1.18
PDLIM2-203ENST00000339162 TARM1B6A8C7 271 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 TRAFD1O14545 582 aaPredicted RBP22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 MC4RP32245 332 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 CCR10P46092 362 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 NRIP1P48552 1158 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 PLK1P53350 603 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 SEMG2Q02383 582 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 CCDC15Q0P6D6 951 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 PSAPL1Q6NUJ1 521 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 AFTPHQ6ULP2 937 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 ALYREFQ86V81 257 aaKnown RBP22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 PIANPQ8IYJ0 282 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 LEMD2Q8NC56 503 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 GATA5Q9BWX5 397 aaPredicted RBP22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 ZFP69BQ9UJL9 534 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 H0YHG0 523 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 IGSF6O95976 241 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 ERVK-21P61565 698 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 NCALDP61601 193 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 OR2AP1Q8NGE2 309 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 PIWIL2Q8TC59 973 aaKnown RBP22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 AGR3Q8TD06 166 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 EBF4Q9BQW3 602 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 GPR63Q9BZJ6 419 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 ZNF711Q9Y462 761 aa22.42■■□□□ 1.18
PDLIM2-203ENST00000339162 DLX3O60479 287 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 APOA4P06727 396 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 PABPC1P11940 636 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 MAGEA9P43362 315 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 MAGEA10P43363 369 aaPredicted RBP22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 TIAL1Q01085 375 aaKnown RBP eCLIP22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 ZBTB16Q05516 673 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 RALGPS1Q5JS13 557 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 TTC7BQ86TV6 843 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 ZSWIM9Q86XI8 627 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 TSPAN17Q96FV3 270 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 APOL5Q9BWW9 433 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 CDH22Q9UJ99 828 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 NEMP2A6NFY4 417 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 OGNP20774 298 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 TARSP26639 723 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 FMO4P31512 558 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 GRIA4P48058 902 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 USP4Q13107 963 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 PEX6Q13608 980 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 TYSND1Q2T9J0 566 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 ZRANB3Q5FWF4 1079 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 TRIM68Q6AZZ1 485 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 PPP4R1Q8TF05 950 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 KCNK4Q9NYG8 393 aa22.41■■□□□ 1.18
PDLIM2-203ENST00000339162 SZT2Q5T011 3432 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 ZNF197O14709 1029 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 VIPR2P41587 438 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 NAGLUP54802 743 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 FAM83EQ2M2I3 478 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 TSNAXIP1Q2TAA8 658 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 FAM45BPQ6NSW5 357 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 CLNKQ7Z7G1 428 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms