RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 FOXB2Q5VYV0 432 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 BSPRYQ5W0U4 402 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 DENND5AQ6IQ26 1287 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 MSANTD2Q6P1R3 559 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 BORAQ6PGQ7 559 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 UGT2A3Q6UWM9 527 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 CCDC149Q6ZUS6 474 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 OTOP3Q7RTS5 596 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 SLC22A9Q8IVM8 553 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 GPR65Q8IYL9 337 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 DSELQ8IZU8 1212 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 LSMEM2Q8N112 164 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 FSTL5Q8N475 847 aaPredicted RBP10.83□□□□□ -0.68
RTN3-201ENST00000338850 KDM1BQ8NB78 822 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 ICA1LQ8NDH6 482 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 CEP70Q8NHQ1 597 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 ZFRQ96KR1 1074 aaKnown RBP10.83□□□□□ -0.68
RTN3-201ENST00000338850 B3GALT6Q96L58 329 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 C1orf74Q96LT6 269 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 OR52B2Q96RD2 323 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 PRRX2Q99811 253 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 SPATA16Q9BXB7 569 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 RHOBTB2Q9BYZ6 727 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 EBF3Q9H4W6 596 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 RETREG1Q9H6L5 497 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 ZNF696Q9H7X3 374 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 MEAF6Q9HAF1 191 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 GOLGA2P5Q9HBQ8 144 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 EML4Q9HC35 981 aaKnown RBP10.83□□□□□ -0.68
RTN3-201ENST00000338850 CHRAC1Q9NRG0 131 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 ABCC13Q9NSE7 274 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 ZNF358Q9NW07 568 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 CACNG4Q9UBN1 327 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 RIMS3Q9UJD0 308 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 ADAMTS6Q9UKP5 1117 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 SLC39A10Q9ULF5 831 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 DTNAQ9Y4J8 743 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 DENND4AQ7Z401 1863 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 HEATR9A2RTY3 570 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 E9PBE3 544 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 TK2O00142 265 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 PDLIM1O00151 329 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 TRIM38O00635 465 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 SDHDO14521 159 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 DLX3O60479 287 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 KLHL41O60662 606 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 MAFKO60675 156 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 RNASEH1O60930 286 aaKnown RBP10.82□□□□□ -0.68
RTN3-201ENST00000338850 PAPLNO95428 1278 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 C1RP00736 705 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 JCHAINP01591 159 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 MPSTP25325 297 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 ARNTP27540 789 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 PEX2P28328 305 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 ALDH1A3P47895 512 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 LEPRP48357 1165 aaKnown RBP10.82□□□□□ -0.68
RTN3-201ENST00000338850 ACADVLP49748 655 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 STX5Q13190 355 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 TUSC3Q13454 348 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 PTK2BQ14289 1009 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 TRIP10Q15642 601 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 TECRLQ5HYJ1 363 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 ARTNQ5T4W7 220 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 VWA5B1Q5TIE3 1220 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 CES3Q6UWW8 571 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 RANBP10Q6VN20 620 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 GPRIN1Q7Z2K8 1008 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 METTL23Q86XA0 190 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 SNX32Q86XE0 403 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 HPS6Q86YV9 775 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 TP53INP2Q8IXH6 220 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 RTL3Q8N8U3 475 aaKnown RBP10.82□□□□□ -0.68
RTN3-201ENST00000338850 PYDC1Q8WXC3 89 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 NDRG1Q92597 394 aaKnown RBP10.82□□□□□ -0.68
RTN3-201ENST00000338850 MYLPFQ96A32 169 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 ASB9Q96DX5 294 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 TUBGCP5Q96RT8 1024 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 PHOX2BQ99453 314 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 PAAF1Q9BRP4 392 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 CEP41Q9BYV8 373 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 SLC25A51Q9H1U9 297 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 POPDC3Q9HBV1 291 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 C8orf4Q9NR00 106 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 TMPRSS4Q9NRS4 437 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.82□□□□□ -0.68
RTN3-201ENST00000338850 TMEM45AQ9NWC5 275 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 XPR1Q9UBH6 696 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 DPP7Q9UHL4 492 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 KMT2EQ8IZD2 1858 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 GREB1Q4ZG55 1949 aa10.82□□□□□ -0.68
RTN3-201ENST00000338850 MYBPHLA2RUH7 354 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 BBIP1A8MTZ0 92 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 CLGNO14967 610 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 SLC7A4O43246 635 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 USP12O75317 370 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 RFPL2O75678 378 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 PDE5AO76074 875 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 AHSGP02765 367 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 USP17L7P0C7H9 530 aa10.81□□□□□ -0.68
RTN3-201ENST00000338850 SPATA31D3P0C874 917 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms