RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 DAAM1Q9Y4D1 1078 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 A3GALT2U3KPV4 340 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 A0A0U1RQF3 1178 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 HSPB2A8KAH6 182 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 SKAP2O75563 359 aaPredicted RBP2.35□□□□□ -2.03
XRCC4-202ENST00000338635 CAVIN2O95810 425 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 PRSS56P0CW18 603 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 TNNT1P13805 278 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 MYOD1P15172 320 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 CHATP28329 748 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 CLCNKAP51800 687 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 NR1H2P55055 460 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 HSPB2Q16082 182 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 EDRF1Q3B7T1 1238 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 SIRPB2Q5JXA9 342 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 JMJD6Q6NYC1 403 aaPredicted RBP2.35□□□□□ -2.03
XRCC4-202ENST00000338635 PGBD2Q6P3X8 592 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 APLFQ8IW19 511 aaPredicted RBP2.35□□□□□ -2.03
XRCC4-202ENST00000338635 CCDC146Q8IYE0 955 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF440Q8IYI8 595 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 DSELQ8IZU8 1212 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 POF1BQ8WVV4 589 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 PPM1EQ8WY54 764 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 TM9SF4Q92544 642 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 STAMBPL1Q96FJ0 436 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 RMDN3Q96TC7 470 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 UPF2Q9HAU5 1272 aaKnown RBP2.35□□□□□ -2.03
XRCC4-202ENST00000338635 DACT1Q9NYF0 836 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 CD207Q9UJ71 328 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 LRCH1Q9Y2L9 728 aa2.35□□□□□ -2.03
XRCC4-202ENST00000338635 NDUFAF8A1L188 74 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 HMX3A6NHT5 357 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 PSMD14O00487 310 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 ARHGEF9O43307 516 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 WDR1O75083 606 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 HTR3AP46098 478 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 MMP14P50281 582 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 PDE1BQ01064 536 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 GTF2H2Q13888 395 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 TIGD6Q17RP2 521 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 MMEL1Q495T6 779 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 FAM53AQ6NSI3 398 aaPredicted RBP2.34□□□□□ -2.03
XRCC4-202ENST00000338635 GTF2H2CQ6P1K8 395 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 SLC36A4Q6YBV0 504 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 ASB18Q6ZVZ8 466 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 TBC1D26Q86UD7 250 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 CACNA2D3Q8IZS8 1091 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 AGBL3Q8NEM8 1001 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 GOLGA1Q92805 767 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 ZC3HAV1LQ96H79 300 aaKnown RBP2.34□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF570Q96NI8 536 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 OPRPNQ99935 248 aaPredicted RBP2.34□□□□□ -2.03
XRCC4-202ENST00000338635 SYT17Q9BSW7 474 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 HAUS8Q9BT25 410 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 TAF1DQ9H5J8 278 aaPredicted RBP2.34□□□□□ -2.03
XRCC4-202ENST00000338635 ERVMER34-1Q9H9K5 563 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 SLC52A3Q9NQ40 469 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 CCDC177Q9NQR7 707 aaPredicted RBP2.34□□□□□ -2.03
XRCC4-202ENST00000338635 SMYD2Q9NRG4 433 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 ZDHHC18Q9NUE0 388 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 SRP68Q9UHB9 627 aaKnown RBP2.34□□□□□ -2.03
XRCC4-202ENST00000338635 RCOR1Q9UKL0 485 aa2.34□□□□□ -2.03
XRCC4-202ENST00000338635 COL5A2P05997 1499 aaPredicted RBP2.34□□□□□ -2.04
XRCC4-202ENST00000338635 ARHGAP10A1A4S6 786 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 MEIOCA2RUB1 952 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 CBY3A6NI87 242 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 IPO5O00410 1097 aaKnown RBP2.33□□□□□ -2.04
XRCC4-202ENST00000338635 KLK8O60259 260 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 CSTBP04080 98 aaKnown RBP2.33□□□□□ -2.04
XRCC4-202ENST00000338635 ERVK-10P10266 1014 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 PCNAP12004 261 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 VEGFAP15692 232 aaPredicted RBP2.33□□□□□ -2.04
XRCC4-202ENST00000338635 GNB3P16520 340 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 PTPN2P17706 415 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 ISL1P61371 349 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 EEF1A1P68104 462 aaKnown RBP2.33□□□□□ -2.04
XRCC4-202ENST00000338635 GAGE5Q13069 117 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 GAGE6Q13070 117 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 TRIM14Q14142 442 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 TMEM187Q14656 261 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 WDR38Q5JTN6 314 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 EEF1A1P5Q5VTE0 462 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 CCDC174Q6PII3 467 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 C1orf228Q6PIY5 440 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 MOB3CQ70IA8 216 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 TAOK1Q7L7X3 1001 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 CERS3Q8IU89 383 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 SCCPDHQ8NBX0 429 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 OR6Y1Q8NGX8 325 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 ZNF473Q8WTR7 871 aaKnown RBP2.33□□□□□ -2.04
XRCC4-202ENST00000338635 RILPL2Q969X0 211 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 SCRN2Q96FV2 425 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 RBM17Q96I25 401 aaKnown RBP2.33□□□□□ -2.04
XRCC4-202ENST00000338635 PSMD1Q99460 953 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 PLCB1Q9NQ66 1216 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 TAGLN3Q9UI15 199 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 OR2W1Q9Y3N9 320 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 C2CD2Q9Y426 696 aa2.33□□□□□ -2.04
XRCC4-202ENST00000338635 PLEKHD1A6NEE1 506 aa2.32□□□□□ -2.04
XRCC4-202ENST00000338635 GOLGA6L9A6NEM1 432 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms