RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 K7ESM1 405 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 NEBLO76041 1014 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 TRBC1P01850 177 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 JUNDP17535 347 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 CD86P42081 329 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 NR2C2P49116 596 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 ACADVLP49748 655 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 THOP1P52888 689 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 HNRNPKP61978 463 aaKnown RBP eCLIP15.28■□□□□ 0.04
PRKN-201ENST00000338468 WASHC5Q12768 1159 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 ZNF211Q13398 564 aaPredicted RBP15.28■□□□□ 0.04
PRKN-201ENST00000338468 ACOX1Q15067 660 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 CRTC1Q6UUV9 634 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 RFLNAQ6ZTI6 216 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 NT5DC3Q86UY8 548 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 OR4C6Q8NH72 309 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 MDM1Q8TC05 714 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 KIAA1524Q8TCG1 905 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 ALG3Q92685 438 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 RBM41Q96IZ5 413 aaKnown RBP15.28■□□□□ 0.04
PRKN-201ENST00000338468 AGAP3Q96P47 875 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 HEMGNQ9BXL5 484 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 RAXQ9Y2V3 346 aa15.28■□□□□ 0.04
PRKN-201ENST00000338468 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.28■□□□□ 0.04
PRKN-201ENST00000338468 LRP4O75096 1905 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 LY6G6EA0A0G2JKS1 128 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 MACROD2A1Z1Q3 448 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 SCAMP1O15126 338 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 FFAR2O15552 330 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 GCATO75600 419 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 CYP2A6P11509 494 aaPredicted RBP15.27■□□□□ 0.04
PRKN-201ENST00000338468 PTPN3P26045 913 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 TRIM23P36406 574 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 ETV3P41162 512 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 NAP1L1P55209 391 aaKnown RBP15.27■□□□□ 0.04
PRKN-201ENST00000338468 PTK2BQ14289 1009 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 NFATC4Q14934 902 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 CDKN3Q16667 212 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 ALG11Q2TAA5 492 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 TEX44Q53QW1 395 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 ESRP1Q6NXG1 681 aaKnown RBP15.27■□□□□ 0.04
PRKN-201ENST00000338468 AADACL2Q6P093 401 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 Q6ZVL8 140 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 BBS12Q6ZW61 710 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 USP45Q70EL2 814 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 TECPR1Q7Z6L1 1165 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 CCDC50Q8IVM0 306 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 PHACTR4Q8IZ21 702 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 HNRNPLLQ8WVV9 542 aaKnown RBP15.27■□□□□ 0.04
PRKN-201ENST00000338468 TSACCQ96A04 125 aaPredicted RBP15.27■□□□□ 0.04
PRKN-201ENST00000338468 HAUS1Q96CS2 278 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 DTD2Q96FN9 168 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 IMP4Q96G21 291 aaKnown RBP15.27■□□□□ 0.04
PRKN-201ENST00000338468 TRIB3Q96RU7 358 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 RBM15Q96T37 977 aaKnown RBP eCLIP15.27■□□□□ 0.04
PRKN-201ENST00000338468 LRRC61Q9BV99 259 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 PCDH9Q9HC56 1237 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 HAUS2Q9NVX0 235 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 SEPT10Q9P0V9 454 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 U3KQA8 63 aa15.27■□□□□ 0.04
PRKN-201ENST00000338468 PTPRBP23467 1997 aa15.27■□□□□ 0.03
PRKN-201ENST00000338468 PLXNB3Q9ULL4 1909 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 CAPN8A6NHC0 703 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 PSMD11O00231 422 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 AQP9O43315 295 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 CD68P34810 354 aaPredicted RBP15.26■□□□□ 0.03
PRKN-201ENST00000338468 PTPN7P35236 360 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 COPS2P61201 443 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 RPL26P61254 145 aaKnown RBP15.26■□□□□ 0.03
PRKN-201ENST00000338468 PTSQ03393 145 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 KIF5AQ12840 1032 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 QPCTQ16769 361 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 LRRC66Q68CR7 880 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 DENND2CQ68D51 928 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 PNCKQ6P2M8 343 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 BZW1Q7L1Q6 419 aaKnown RBP15.26■□□□□ 0.03
PRKN-201ENST00000338468 LPCAT1Q8NF37 534 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 TFB1MQ8WVM0 346 aaKnown RBP15.26■□□□□ 0.03
PRKN-201ENST00000338468 P3H4Q92791 437 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 NUS1Q96E22 293 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 TEKT5Q96M29 485 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 QKIQ96PU8 341 aaKnown RBP eCLIP15.26■□□□□ 0.03
PRKN-201ENST00000338468 LYSMD1Q96S90 227 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 LGR4Q9BXB1 951 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 CLPBQ9H078 707 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 SLC25A51Q9H1U9 297 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 GLOD4Q9HC38 313 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 NLGN3Q9NZ94 848 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 APOBEC3BQ9UH17 382 aaKnown RBP15.26■□□□□ 0.03
PRKN-201ENST00000338468 RPL26L1Q9UNX3 145 aaKnown RBP15.26■□□□□ 0.03
PRKN-201ENST00000338468 PCDHGA1Q9Y5H4 931 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 ADGRG1Q9Y653 693 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 CSNK1G3Q9Y6M4 447 aa15.26■□□□□ 0.03
PRKN-201ENST00000338468 CCDC66A2RUB6 948 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 TMEM202A6NGA9 273 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 H3BM21 787 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 APOC4-APOC2K7ER74 178 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 APOC2P02655 101 aa15.25■□□□□ 0.03
PRKN-201ENST00000338468 CELA2BP08218 269 aaPredicted RBP15.25■□□□□ 0.03
PRKN-201ENST00000338468 HOXC4P09017 264 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms