RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CLDN7O95471 211 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 AHSGP02765 367 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 GABRB3P28472 473 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SPRP35270 261 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 HMGCLP35914 325 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CSE1LP55060 971 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 POLR2LP62875 67 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CDKN3Q16667 212 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 POM121L1PQ3SYA9 428 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 BRAT1Q6PJG6 821 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TSPAN33Q86UF1 283 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 C2CD4AQ8NCU7 369 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MDM1Q8TC05 714 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ERLEC1Q96DZ1 483 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SCRN2Q96FV2 425 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SRPK1Q96SB4 655 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TRPV5Q9NQA5 729 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 IL17CQ9P0M4 197 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MARCH4Q9P2E8 410 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 FKBPLQ9UIM3 349 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 FBXO5Q9UKT4 447 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 STARD13Q9Y3M8 1113 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SCN8AQ9UQD0 1980 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 K7EQS6 105 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 EPHX1P07099 455 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PSMA3P25788 255 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 WASP42768 502 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TNFRSF4P43489 277 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 LIMK2P53671 638 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SEC13P55735 322 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 LEXMQ3ZCV2 418 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ZNF805Q5CZA5 627 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TPRG1Q6ZUI0 275 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 USP45Q70EL2 814 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 LDB1Q86U70 411 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SUGP1Q8IWZ8 645 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 OR4L1Q8NH43 312 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 GABPB2Q8TAK5 448 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 OR8D1Q8WZ84 308 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SPOCK2Q92563 424 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 EZH1Q92800 747 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 LYSMD1Q96S90 227 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MCMBPQ9BTE3 642 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SUN2Q9UH99 717 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SARDHQ9UL12 918 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 FNDC3AQ9Y2H6 1198 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PKP3Q9Y446 797 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PIAS3Q9Y6X2 628 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TMEM120BA0PK00 339 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 KPNA3O00505 521 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CD3EAPO15446 510 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 RFPL1O75677 317 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PRNPP04156 253 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PYGBP11216 843 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 HNRNPLP14866 589 aaKnown RBP eCLIP14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 HADHAP40939 763 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PON2Q15165 354 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 UGP2Q16851 508 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PTCRAQ6ISU1 281 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 FSTL4Q6MZW2 842 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CRTC1Q6UUV9 634 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ZC3HC1Q86WB0 502 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CILP2Q8IUL8 1156 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ZNF513Q8N8E2 541 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 VPS39Q96JC1 886 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MCCC1Q96RQ3 725 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 FAM129BQ96TA1 746 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 FBXO6Q9NRD1 293 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CATSPERZQ9NTU4 200 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MTO1Q9Y2Z2 717 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 STON1Q9Y6Q2 735 aa14.75□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TSPAN11A1L157 253 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 C16orf96A6NNT2 1141 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 NARSO43776 548 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 HAUS5O94927 633 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PRSS56P0CW18 603 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TIMP2P16035 220 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TIE1P35590 1138 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MPP2Q14168 576 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ELAVL3Q14576 367 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ZNF789Q5FWF6 425 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 IER5LQ5T953 404 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 LRRC66Q68CR7 880 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TTC19Q6DKK2 380 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 AFTPHQ6ULP2 937 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TIFABQ6ZNK6 161 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 KIAA0408Q6ZU52 694 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SH2D5Q6ZV89 423 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TTC7BQ86TV6 843 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 RALGPS2Q86X27 583 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 LMNTD2Q8IXW0 634 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CHPFQ8IZ52 775 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 DCLK2Q8N568 766 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PIP4K2CQ8TBX8 421 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 DNASE1L2Q92874 299 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 RHOJQ9H4E5 214 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CNOT10Q9H9A5 744 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PRSS16Q9NQE7 514 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 DKK3Q9UBP4 350 aa14.74□□□□□ -0.05
CDK5RAP3-201ENST00000338399 B4GALT6Q9UBX8 382 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms