RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SUPT3HB4E1H0 165 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 SUPT3HO75486 399 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 STC2O76061 302 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 IPO13O94829 963 aaKnown RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 SERPINF2P08697 491 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 LINC00032P0C843 101 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 GFAPP14136 432 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 OXCT1P55809 520 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 CYP4F8P98187 520 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 POU4F1Q01851 419 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 PDAP1Q13442 181 aaKnown RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 TSNQ15631 228 aaKnown RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 TRMT5Q32P41 509 aaKnown RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 ZRANB3Q5FWF4 1079 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 TMCO4Q5TGY1 634 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 ISCA2Q86U28 154 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 NPAS4Q8IUM7 802 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 SCML4Q8N228 414 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 ARL14EPQ8N8R7 260 aaPredicted RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 SIDT2Q8NBJ9 832 aaKnown RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 DIS3LQ8TF46 1054 aaKnown RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 MRPL57Q9BQC6 102 aaKnown RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 SEMA6AQ9H2E6 1030 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 PIF1Q9H611 641 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 S100A14Q9HCY8 104 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 DNMT3LQ9UJW3 386 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 CLEC4EQ9ULY5 219 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 ANKRD6Q9Y2G4 727 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 IGLV3-10A0A075B6K4 115 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 KRT87PA6NCN2 255 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 ZNF840PA6NDX5 716 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 MOXD2PA6NHM9 499 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 PRRG1O14668 218 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 KIF3CO14782 793 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 RHOBTB1O94844 696 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 ATP5F1P24539 256 aaPredicted RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 CRABP2P29373 138 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 PPARGP37231 505 aaPredicted RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 LEPRP48357 1165 aaKnown RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 ZNF135P52742 658 aaPredicted RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 AP2B1P63010 937 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 CREB5Q02930 508 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 IL10RBQ08334 325 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 CDC16Q13042 620 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 ART3Q13508 389 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 AGAP9Q5VTM2 703 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 FAM91A1Q658Y4 838 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 TAS2R42Q7RTR8 314 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 PPFIBP2Q8ND30 876 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 BHLHE22Q8NFJ8 381 aaPredicted RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 SEPT8Q92599 483 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 GCNAQ96QF7 691 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 GPR21Q99679 349 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 CLSTN3Q9BQT9 956 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 MMADHCQ9H3L0 296 aaPredicted RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 COPS7BQ9H9Q2 264 aaPredicted RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 WDR41Q9HAD4 459 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 MID1IP1Q9NPA3 183 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 CATSPERZQ9NTU4 200 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 POLR3BQ9NW08 1133 aaPredicted RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 UBA2Q9UBT2 640 aaPredicted RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 AGO1Q9UL18 857 aaKnown RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 CHD9Q3L8U1 2897 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 MROH6A6NGR9 719 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 CAPN8A6NHC0 703 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 OR6C75A6NL08 312 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 H0Y626 953 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 SRP72O76094 671 aaKnown RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 RTN3O95197 1032 aaPredicted RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 C1RP00736 705 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 ACRP10323 421 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 NELFEP18615 380 aaKnown RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 CASP2P42575 452 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 SH3BP2P78314 561 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 DEFB103AP81534 67 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 GRB7Q14451 532 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 MMEL1Q495T6 779 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 ARMC12Q5T9G4 340 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 CYHR1Q6ZMK1 362 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 FBXW8Q8N3Y1 598 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 GALNT4Q8N4A0 578 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 OR4L1Q8NH43 312 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 SPPL2BQ8TCT7 592 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 GDPD5Q8WTR4 605 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 CDKN2AIPNLQ96HQ2 116 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 ACOX2Q99424 681 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 ZNF184Q99676 751 aaPredicted RBP8.85□□□□□ -0.99
SNCA-201ENST00000336904 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.85□□□□□ -0.99
SNCA-201ENST00000336904 RNF208Q9H0X6 261 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 TNKS2Q9H2K2 1166 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 GSTO2Q9H4Y5 243 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 SCUBE2Q9NQ36 999 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 NSMCE4AQ9NXX6 385 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 FAM8A1Q9UBU6 413 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 PCDHB9Q9Y5E1 797 aa8.85□□□□□ -0.99
SNCA-201ENST00000336904 LOC285095A0A1B0GVY8 99 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 SMAD6O43541 496 aaKnown RBP8.84□□□□□ -0.99
SNCA-201ENST00000336904 TBL1XO60907 577 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 ALDH1A1P00352 501 aa8.84□□□□□ -0.99
SNCA-201ENST00000336904 LMNAP02545 664 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms