RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ADAMTS10Q9H324 1103 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 TLE6Q9H808 572 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 EXD2Q9NVH0 621 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 OXSMQ9NWU1 459 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 GALPQ9UBC7 116 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 CRLS1Q9UJA2 301 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 MOSPD1Q9UJG1 213 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 DOLKQ9UPQ8 538 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 KIAA1217Q5T5P2 1943 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 NPEPPSL1A6NEC2 478 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 I6L893 689 aaPredicted RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 PIP5K1BO14986 540 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 PFDN6O15212 129 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 NIPSNAP2O75323 286 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 GOT2P00505 430 aaKnown RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 RBP1P09455 135 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 MBL2P11226 248 aaPredicted RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 GLDCP23378 1020 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 PSMA4P25789 261 aaKnown RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 AGTR2P50052 363 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 DIO3P55073 304 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 RHOAP61586 193 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 MADCAM1Q13477 382 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 ITGA7Q13683 1181 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 CEACAM7Q14002 265 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 LAPTM4AQ15012 233 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 PGS1Q32NB8 556 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 RABL3Q5HYI8 236 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 PAQR3Q6TCH7 311 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 TOP6BLQ8N6T0 577 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 MAB21L3Q8N8X9 362 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 ANKRD49Q8WVL7 239 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 SORT1Q99523 831 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 PTPN18Q99952 460 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 MTG1Q9BT17 334 aaPredicted RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 RUBCNLQ9H714 662 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 SCUBE2Q9NQ36 999 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 WWOXQ9NZC7 414 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 KLQ9UEF7 1012 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 PAIP2BQ9ULR5 123 aaKnown RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 DOCK3Q8IZD9 2030 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 C2orf81A6NN90 581 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 CD3EAPO15446 510 aaKnown RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 NBNO60934 754 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 SLC35E2BP0CK96 405 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 GALK1P51570 392 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 LRRC74AQ0VAA2 488 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 PWP1Q13610 501 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 ATP1A4Q13733 1029 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 CCNIQ14094 377 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 ATXN7L2Q5T6C5 722 aaPredicted RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 DCLRE1AQ6PJP8 1040 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 MAVSQ7Z434 540 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 CBR4Q8N4T8 237 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 FAM81AQ8TBF8 368 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 PYCR2Q96C36 320 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 SCLYQ96I15 445 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 SERPINB11Q96P15 392 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 ROGDIQ9GZN7 287 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 SSU72Q9NP77 194 aaKnown RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 PCDHB7Q9Y5E2 793 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 HS3ST4Q9Y661 456 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 CACNA1CQ13936 2221 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 ZCWPW2A0A1B0GU75 182 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 H3BSA7 217 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 CLOCKO15516 846 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 APOA4P06727 396 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 DHRS4L1P0CG22 281 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 CYP4B1P13584 511 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 MAGP20916 626 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 UGT1A1P22309 533 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 UGT1A4P22310 534 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 AQP1P29972 269 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 UGT1A3P35503 534 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 UGT1A5P35504 534 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 CDKN1CP49918 316 aaPredicted RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 CDK18Q07002 472 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 PPIDQ08752 370 aaKnown RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 GRIK3Q13003 919 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 MAPRE2Q15555 327 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 HSF5Q4G112 596 aaPredicted RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 INTS6LQ5JSJ4 861 aaKnown RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 ANKS6Q68DC2 871 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 TIGD7Q6NT04 549 aaPredicted RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 CPNE9Q8IYJ1 553 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 RP9Q8TA86 221 aaKnown RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 OLFM1Q99784 485 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 MRPL57Q9BQC6 102 aaKnown RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 ZYG11BQ9C0D3 744 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 POLR1EQ9GZS1 481 aaKnown RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 PAIP1Q9H074 479 aaKnown RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 STARD7Q9NQZ5 370 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 LIMD1Q9UGP4 676 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 PPME1Q9Y570 386 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 PCDHB5Q9Y5E4 795 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 SHROOM3Q8TF72 1996 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 DNAJC25-GNG10A0A024R161 153 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 MANSC4A6NHS7 340 aaPredicted RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 CDC7O00311 574 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 MTX2O75431 263 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms