RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 PDLIM7Q9NR12 457 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 TRNAU1APQ9NX07 287 aaKnown RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 DNAJB4Q9UDY4 337 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PCDHGB5Q9Y5G0 923 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 KCNU1A8MYU2 1149 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PMM2O15305 246 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 CLOCKO15516 846 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 SYNCRIPO60506 623 aaKnown RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 F2P00734 622 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 ABCB1P08183 1280 aaPredicted RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 LINC00032P0C843 101 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 ZNF23P17027 643 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 FUT4P22083 530 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 YAP1P46937 504 aaKnown RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 ACLYP53396 1101 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PSME3P61289 254 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PURAQ00577 322 aaKnown RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 CDK18Q07002 472 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 SLC10A7Q0GE19 358 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 SLC10A2Q12908 348 aaPredicted RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 ELAVL2Q12926 359 aaKnown RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 MSLNQ13421 630 aaPredicted RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 TCEAL1Q15170 157 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 MAPRE2Q15555 327 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 AP5B1Q2VPB7 878 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PGS1Q32NB8 556 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 LSM12Q3MHD2 195 aaKnown RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 ARMC12Q5T9G4 340 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 IL23RQ5VWK5 629 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 TMCO5AQ8N6Q1 288 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PQLC3Q8N755 202 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 HMCESQ96FZ2 354 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 ZNF778Q96MU6 729 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 VAT1Q99536 393 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PTPN18Q99952 460 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 SLC39A3Q9BRY0 314 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 TTPALQ9BTX7 342 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 GATA5Q9BWX5 397 aaPredicted RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 BCO2Q9BYV7 579 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 TNKS2Q9H2K2 1166 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 ZDHHC6Q9H6R6 413 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 CCSER2Q9H7U1 834 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 C6orf203Q9P0P8 240 aaPredicted RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 SEPT3Q9UH03 358 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 EFR3BQ9Y2G0 817 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 SH3GLB1Q9Y371 365 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PTCH2Q9Y6C5 1203 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 A0A1B0GTW7 788 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 KANSL1LA0AUZ9 987 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 BCLAF3A2AJT9 711 aaKnown RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 ANKRD33BA6NCL7 494 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 SYCE1LA8MT33 242 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 TMEM233B4DJY2 109 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 J3KR12 359 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PDLIM1O00151 329 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 SCAMP1O15126 338 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 STBD1O95210 358 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 APOA4P06727 396 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 ITGALP20701 1170 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PCSK6P29122 969 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PTPN9P43378 593 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 NUP107P57740 925 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 TAS2R39P59534 338 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 LSM3P62310 102 aaKnown RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 FKBP1BP68106 108 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 OCA2Q04671 838 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 NCBP2-AS2Q69YL0 99 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 DOK6Q6PKX4 331 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 GPRIN1Q7Z2K8 1008 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 YAF2Q8IY57 180 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 DPF3Q92784 378 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 WDR83Q9BRX9 315 aaKnown RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 HGH1Q9BTY7 390 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 SCHIP1Q9P0W5 487 aaPredicted RBP6.49□□□□□ -1.37
HMG20A-201ENST00000336216 MORF4L1Q9UBU8 362 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 SLC2A6Q9UGQ3 507 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 DNMT3LQ9UJW3 386 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 ADAM28Q9UKQ2 775 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 SORCS3Q9UPU3 1222 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PHF24Q9UPV7 400 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 VWA7Q9Y334 891 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 PCDHB12Q9Y5F1 795 aa6.49□□□□□ -1.37
HMG20A-201ENST00000336216 TMEM88BA6NKF7 163 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 BIRC5O15392 142 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 ZBTB14O43829 449 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 CLASP2O75122 1294 aaKnown RBP6.48□□□□□ -1.37
HMG20A-201ENST00000336216 NTRK1P04629 796 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 ITGB1P05556 798 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 EDNRBP24530 442 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 IGFBP6P24592 240 aaPredicted RBP6.48□□□□□ -1.37
HMG20A-201ENST00000336216 RFX3P48380 749 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 HSPA13P48723 471 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 RAB10P61026 200 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 PFKPQ01813 784 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 BCL2L1Q07817 233 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 CPSF6Q16630 551 aaKnown RBP eCLIP6.48□□□□□ -1.37
HMG20A-201ENST00000336216 CCDC153Q494R4 210 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 ANKS6Q68DC2 871 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 SAPCD2Q86UD0 394 aa6.48□□□□□ -1.37
HMG20A-201ENST00000336216 CAND1Q86VP6 1230 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms