RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 PIRTP0C851 137 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 GFAPP14136 432 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 CARTPTQ16568 116 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 VASH1Q7L8A9 365 aaPredicted RBP16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 TMEM86AQ8N2M4 240 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 BLOC1S5Q8TDH9 187 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 UNC93B1Q9H1C4 597 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 CACNA2D2Q9NY47 1150 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 GMPR2Q9P2T1 348 aaKnown RBP16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 UBA6A0AVT1 1052 aaPredicted RBP16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 PRORSD1PA6NEY8 169 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 MATN3O15232 486 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 NPHS1O60500 1241 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 CDH3P22223 829 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 CAMK2BQ13554 666 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 PCBP1Q15365 356 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 CALML6Q8TD86 181 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 DDI1Q8WTU0 396 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 ASB9Q96DX5 294 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 HAUS8Q9BT25 410 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 KATNBL1Q9H079 304 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 ZFYVE28Q9HCC9 887 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 TBC1D23Q9NUY8 699 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 FBXO9Q9UK97 447 aaPredicted RBP16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 VWA7Q9Y334 891 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 ANGPT2O15123 496 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 ALDH2P05091 517 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 CDH2P19022 906 aaPredicted RBP16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 BCAP31P51572 246 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 SQLEQ14534 574 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 TUBGCP3Q96CW5 907 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 CCDC126Q96EE4 140 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 TSPAN17Q96FV3 270 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 TMEM209Q96SK2 561 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 NEURL2Q9BR09 285 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 SLC25A23Q9BV35 468 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 PLGRKTQ9HBL7 147 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 SERPINH1P50454 418 aaKnown RBP16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 NR1H2P55055 460 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 HECTD2Q5U5R9 776 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 FAAH2Q6GMR7 532 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 PIM3Q86V86 326 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 SPATA2LQ8IUW3 424 aaPredicted RBP16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 ZNF786Q8N393 782 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 Q8N9G6 341 aaPredicted RBP16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 FAR2Q96K12 515 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 OSBPL2Q9H1P3 480 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 PIF1Q9H611 641 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 TNFRSF12AQ9NP84 129 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 ABI2Q9NYB9 513 aaPredicted RBP16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 THEGQ9P2T0 379 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 PCDHGA7Q9Y5G6 932 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 PTCH2Q9Y6C5 1203 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 MAFKO60675 156 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 OR4Q2P0C623 313 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 ARNTP27540 789 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 CDH15P55291 814 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 HERC3Q15034 1050 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 CYP2A13Q16696 494 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 AHI1Q8N157 1196 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 CENPSQ8N2Z9 138 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 PCYOX1LQ8NBM8 494 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 GPR78Q96P69 363 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 TRIM8Q9BZR9 551 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 MID1IP1Q9NPA3 183 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 TBCCD1Q9NVR7 557 aa16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 ZNF638Q14966 1978 aaKnown RBP16.54■□□□□ 0.24
CDC42EP4-201ENST00000335793 SLC22A2O15244 555 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 SIX3O95343 332 aaPredicted RBP16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 ODC1P11926 461 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 RPL10P27635 214 aaKnown RBP16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 ARCN1P48444 511 aaKnown RBP16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 PFKPQ01813 784 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 NSUN2Q08J23 767 aaKnown RBP eCLIP16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 CAPRIN1Q14444 709 aaKnown RBP16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 SF3B4Q15427 424 aaKnown RBP eCLIP16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 PFKFB4Q16877 469 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 FUT11Q495W5 492 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 SAMD4BQ5PRF9 694 aaKnown RBP16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 TBCELQ5QJ74 424 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 MARC1Q5VT66 337 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 EGFLAMQ63HQ2 1017 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 RNF19BQ6ZMZ0 732 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 RAB44Q7Z6P3 723 aaPredicted RBP16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 ANKRD49Q8WVL7 239 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 CANT1Q8WVQ1 401 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 SLC29A1Q99808 456 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 RGS18Q9NS28 235 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 PTGDR2Q9Y5Y4 395 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 PRSS51A0A1B0GVH4 220 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 ARL5CA6NH57 179 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 ACOT8O14734 319 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 NAT2P11245 290 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 VPS26BQ4G0F5 336 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 TIGD7Q6NT04 549 aaPredicted RBP16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 MIB1Q86YT6 1006 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 THAP11Q96EK4 314 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 MRGPRX2Q96LB1 330 aa16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 ZNF512Q96ME7 567 aaPredicted RBP16.53■□□□□ 0.24
CDC42EP4-201ENST00000335793 RSL24D1Q9UHA3 163 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms