RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 SOX4Q06945 474 aaPredicted RBP13.8□□□□□ -0.2
DNMT3B-202ENST00000328111 PARP15Q460N3 678 aa13.8□□□□□ -0.2
DNMT3B-202ENST00000328111 VPS26BQ4G0F5 336 aa13.8□□□□□ -0.2
DNMT3B-202ENST00000328111 ZNF621Q6ZSS3 439 aa13.8□□□□□ -0.2
DNMT3B-202ENST00000328111 PGAM4Q8N0Y7 254 aa13.8□□□□□ -0.2
DNMT3B-202ENST00000328111 UBR7Q8N806 425 aa13.8□□□□□ -0.2
DNMT3B-202ENST00000328111 SPATA16Q9BXB7 569 aa13.8□□□□□ -0.2
DNMT3B-202ENST00000328111 RNF208Q9H0X6 261 aa13.8□□□□□ -0.2
DNMT3B-202ENST00000328111 CRTAC1Q9NQ79 661 aa13.8□□□□□ -0.2
DNMT3B-202ENST00000328111 PLCH1Q4KWH8 1693 aa13.8□□□□□ -0.2
DNMT3B-202ENST00000328111 ANKRD12Q6UB98 2062 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 A0A087WXM4 84 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 PIRO00625 290 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 BEST1O76090 585 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 AHSGP02765 367 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 OR56A5P0C7T3 313 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 PKMP14618 531 aaKnown RBP13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 MSH3P20585 1137 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 USP41Q3LFD5 358 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 MTX3Q5HYI7 312 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 DET1Q7L5Y6 550 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 YAF2Q8IY57 180 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 UCMAQ8WVF2 138 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 KCTD13Q8WZ19 329 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 FAM72CH0Y354 149 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 HLA-DQB2P05538 268 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 PIK3CGP48736 1102 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 PABPC1LQ4VXU2 614 aaKnown RBP13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 FAM72AQ5TYM5 149 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 FAM72DQ6L9T8 149 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 ADAMTSL2Q86TH1 951 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 FAM72BQ86X60 149 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 PHTF2Q8N3S3 785 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 GRIN3AQ8TCU5 1115 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 EBF2Q9HAK2 575 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 ZMYND8Q9ULU4 1186 aaPredicted RBP13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 TRIM17Q9Y577 477 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 F8W810 466 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 HNRNPRO43390 633 aaKnown RBP13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 ANXA5P08758 320 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 EPB42P16452 691 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 POU1F1P28069 291 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 SLC10A7Q0GE19 358 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 PAFAH1B3Q15102 231 aaKnown RBP13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 PPP1R15BQ5SWA1 713 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 LZICQ8WZA0 190 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 STK39Q9UEW8 545 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 SLC2A6Q9UGQ3 507 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 MYH4Q9Y623 1939 aa13.79□□□□□ -0.2
DNMT3B-202ENST00000328111 ZBTB14O43829 449 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 CKBP12277 381 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 TYMPP19971 482 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 CYP2A7P20853 494 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 PROZP22891 400 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 PBX3P40426 434 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 CDC16Q13042 620 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 KIAA0930Q6ICG6 404 aaPredicted RBP13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 GCNT7Q6ZNI0 430 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 ZNF276Q8N554 614 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 CNTD1Q8N815 330 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 SPPL2AQ8TCT8 520 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 UGT2B28Q9BY64 529 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 ZDHHC6Q9H6R6 413 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 SIRPGQ9P1W8 387 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 UBXN8O00124 270 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 KPNA3O00505 521 aaPredicted RBP13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 SEPT4O43236 478 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 CLDN11O75508 207 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 GOT2P00505 430 aaKnown RBP13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 IDO1P14902 403 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 IRF8Q02556 426 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 GNA12Q03113 381 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 ZC3HC1Q86WB0 502 aaKnown RBP13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 TREML1Q86YW5 311 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 ARFGAP1Q8N6T3 406 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 HAPLN3Q96S86 360 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 ABCG8Q9H221 673 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 OXSMQ9NWU1 459 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 GNEQ9Y223 722 aaKnown RBP13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 RAI2Q9Y5P3 530 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 NPEPPSL1A6NEC2 478 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 PRMT5O14744 637 aaPredicted RBP13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 NTRK1P04629 796 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 HTR7P34969 479 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 GMPRP36959 345 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 ACSM2AQ08AH3 577 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 ACAP2Q15057 778 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 ACSM2BQ68CK6 577 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 FRMD7Q6ZUT3 714 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 EID3Q8N140 333 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 PLD6Q8N2A8 252 aaKnown RBP13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 TWIST2Q8WVJ9 160 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 PPM1HQ9ULR3 514 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 TMEM233B4DJY2 109 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 MT-ND1P03886 318 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 RPL17P18621 184 aaKnown RBP13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 CORO1AP31146 461 aaKnown RBP13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 PITRM1Q5JRX3 1037 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 PPM1LQ5SGD2 360 aa13.78□□□□□ -0.2
DNMT3B-202ENST00000328111 NUDT18Q6ZVK8 323 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms