RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 PTERQ96BW5 349 aa21.44■■□□□ 1.02
LIMS2-201ENST00000324938 CREBZFQ9NS37 354 aa21.44■■□□□ 1.02
LIMS2-201ENST00000324938 FIS1Q9Y3D6 152 aa21.44■■□□□ 1.02
LIMS2-201ENST00000324938 CLDN11O75508 207 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 ZNF140P52738 457 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-201ENST00000324938 CDC16Q13042 620 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 PIGGQ5H8A4 983 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 ZNF678Q5SXM1 525 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 HECTD3Q5T447 861 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 DENND1CQ8IV53 801 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 EFCAB1Q9HAE3 211 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 NLE1Q9NVX2 485 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-201ENST00000324938 POLR3BQ9NW08 1133 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-201ENST00000324938 EIF4E1BA6NMX2 242 aaKnown RBP21.43■■□□□ 1.02
LIMS2-201ENST00000324938 COCHO43405 550 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 CRTAMO95727 393 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 ZNF37AP17032 561 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-201ENST00000324938 CR2P20023 1033 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 RGRP47804 291 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 C1QTNF8P60827 252 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 SDCCAG8Q86SQ7 713 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-201ENST00000324938 CDKN2AIPNLQ96HQ2 116 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 NSMCE3Q96MG7 304 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 AARSD1Q9BTE6 412 aaKnown RBP21.43■■□□□ 1.02
LIMS2-201ENST00000324938 SPON2Q9BUD6 331 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 TRPC7Q9HCX4 862 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 INTS10Q9NVR2 710 aaKnown RBP21.43■■□□□ 1.02
LIMS2-201ENST00000324938 BACE2Q9Y5Z0 518 aa21.43■■□□□ 1.02
LIMS2-201ENST00000324938 ILVBLA1L0T0 632 aa21.42■■□□□ 1.02
LIMS2-201ENST00000324938 TCAF2A6NFQ2 919 aa21.42■■□□□ 1.02
LIMS2-201ENST00000324938 SMIM24O75264 130 aa21.42■■□□□ 1.02
LIMS2-201ENST00000324938 RPL17P18621 184 aaKnown RBP21.42■■□□□ 1.02
LIMS2-201ENST00000324938 OR1D2P34982 312 aa21.42■■□□□ 1.02
LIMS2-201ENST00000324938 ZNF423Q2M1K9 1284 aa21.42■■□□□ 1.02
LIMS2-201ENST00000324938 USP41Q3LFD5 358 aa21.42■■□□□ 1.02
LIMS2-201ENST00000324938 CHST9Q7L1S5 443 aa21.42■■□□□ 1.02
LIMS2-201ENST00000324938 UCMAQ8WVF2 138 aa21.42■■□□□ 1.02
LIMS2-201ENST00000324938 WDR41Q9HAD4 459 aa21.42■■□□□ 1.02
LIMS2-201ENST00000324938 SPO11Q9Y5K1 396 aa21.42■■□□□ 1.02
LIMS2-201ENST00000324938 PLXNA4Q9HCM2 1894 aa21.42■■□□□ 1.02
LIMS2-201ENST00000324938 H3BNX3 289 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 INSIG1O15503 277 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 THOP1P52888 689 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 HERVK_113P63132 956 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 SQLEQ14534 574 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 GSTA3Q16772 222 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 HIPK4Q8NE63 616 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 CDRT15Q96T59 188 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 ERVK-6Q9BXR3 956 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 CWH43Q9H720 699 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 ADAMTS6Q9UKP5 1117 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 TRAF6Q9Y4K3 522 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 ARIH1Q9Y4X5 557 aaPredicted RBP21.41■■□□□ 1.02
LIMS2-201ENST00000324938 UBFD1O14562 309 aaKnown RBP21.41■■□□□ 1.02
LIMS2-201ENST00000324938 STC2O76061 302 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 KLKB1P03952 638 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 RHOCP08134 193 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 ENO3P13929 434 aaPredicted RBP21.41■■□□□ 1.02
LIMS2-201ENST00000324938 RAG1P15918 1043 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 HMGA1P17096 107 aaKnown RBP21.41■■□□□ 1.02
LIMS2-201ENST00000324938 ART3Q13508 389 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 UNC50Q53HI1 259 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 RNF168Q8IYW5 571 aaPredicted RBP21.41■■□□□ 1.02
LIMS2-201ENST00000324938 VCX3BQ9H321 246 aa21.41■■□□□ 1.02
LIMS2-201ENST00000324938 SUPT7LO94864 414 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 PSMA3P25788 255 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 PMLP29590 882 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 CORO1AP31146 461 aaKnown RBP21.4■■□□□ 1.02
LIMS2-201ENST00000324938 SCNN1BP51168 640 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 SGSHP51688 502 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 TAF1AQ15573 450 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-201ENST00000324938 AFTPHQ6ULP2 937 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 RHEBL1Q8TAI7 183 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 VN1R3Q9BXE9 311 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 TDRD1Q9BXT4 1180 aaKnown RBP21.4■■□□□ 1.02
LIMS2-201ENST00000324938 PACSIN3Q9UKS6 424 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 A0A1B0GVM2 712 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 PDAP1Q13442 181 aaKnown RBP21.4■■□□□ 1.02
LIMS2-201ENST00000324938 GK5Q6ZS86 529 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 HMGCLL1Q8TB92 370 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 RMDN1Q96DB5 314 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 EXOC2Q96KP1 924 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 SCUBE2Q9NQ36 999 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 ZDHHC7Q9NXF8 308 aa21.4■■□□□ 1.02
LIMS2-201ENST00000324938 UTP6Q9NYH9 597 aaKnown RBP21.4■■□□□ 1.02
LIMS2-201ENST00000324938 AFF4Q9UHB7 1163 aaKnown RBP21.4■■□□□ 1.02
LIMS2-201ENST00000324938 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.39■■□□□ 1.01
LIMS2-201ENST00000324938 CASQ2O14958 399 aaPredicted RBP21.39■■□□□ 1.01
LIMS2-201ENST00000324938 UBDO15205 165 aa21.39■■□□□ 1.01
LIMS2-201ENST00000324938 SEC24AO95486 1093 aa21.39■■□□□ 1.01
LIMS2-201ENST00000324938 CES1P23141 567 aa21.39■■□□□ 1.01
LIMS2-201ENST00000324938 DPP6P42658 865 aa21.39■■□□□ 1.01
LIMS2-201ENST00000324938 ALDH7A1P49419 539 aaKnown RBP21.39■■□□□ 1.01
LIMS2-201ENST00000324938 ZNF177Q13360 481 aaPredicted RBP21.39■■□□□ 1.01
LIMS2-201ENST00000324938 CEACAM7Q14002 265 aa21.39■■□□□ 1.01
LIMS2-201ENST00000324938 MAPRE2Q15555 327 aa21.39■■□□□ 1.01
LIMS2-201ENST00000324938 GLT6D1Q7Z4J2 308 aa21.39■■□□□ 1.01
LIMS2-201ENST00000324938 MYRFLQ96LU7 910 aa21.39■■□□□ 1.01
LIMS2-201ENST00000324938 ASB2Q96Q27 587 aa21.39■■□□□ 1.01
LIMS2-201ENST00000324938 PPP1R12CQ9BZL4 782 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms