RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 MFSD1Q9H3U5 465 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 FBXO44Q9H4M3 255 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 AKTIPQ9H8T0 292 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 ATP13A1Q9HD20 1204 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 TMEM248Q9NWD8 314 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 A0A0D9SEW6 157 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 MROH6A6NGR9 719 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 HSPA1AP0DMV8 641 aaKnown RBP17.43■□□□□ 0.38
COL9A1-201ENST00000320755 HSPA1BP0DMV9 641 aaKnown RBP17.43■□□□□ 0.38
COL9A1-201ENST00000320755 STX1BP61266 288 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 SATB1Q01826 763 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 VARS2Q5ST30 1063 aaKnown RBP17.43■□□□□ 0.38
COL9A1-201ENST00000320755 FAM171A1Q5VUB5 890 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 ARHGAP18Q8N392 663 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 ADCY4Q8NFM4 1077 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 ASB9Q96DX5 294 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 UROC1Q96N76 676 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 CYP2S1Q96SQ9 504 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 COQ10BQ9H8M1 238 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 CROTQ9UKG9 612 aa17.43■□□□□ 0.38
COL9A1-201ENST00000320755 KIF3CO14782 793 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 ALDOCP09972 364 aaKnown RBP17.42■□□□□ 0.38
COL9A1-201ENST00000320755 ECT2LQ008S8 904 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 MAPRE2Q15555 327 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 OR4D1Q15615 310 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 VPS26BQ4G0F5 336 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.42■□□□□ 0.38
COL9A1-201ENST00000320755 CLLU1OSQ5K130 101 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 MSANTD2Q6P1R3 559 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 MFN1Q8IWA4 741 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 ZNF683Q8IZ20 524 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 MARVELD2Q8N4S9 558 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 FAM110BQ8TC76 370 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 GIPC2Q8TF65 315 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 DLG3Q92796 817 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 BTN2A3PQ96KV6 586 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 CCSER2Q9H7U1 834 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 NOL11Q9H8H0 719 aaKnown RBP17.42■□□□□ 0.38
COL9A1-201ENST00000320755 ZFYVE28Q9HCC9 887 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 SPAG4Q9NPE6 437 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 PCDHB5Q9Y5E4 795 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 A0A1B0GTW7 788 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 ARHGEF37A1IGU5 675 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 DENRO43583 198 aaKnown RBP17.42■□□□□ 0.38
COL9A1-201ENST00000320755 LINC00032P0C843 101 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 CCND3P30281 292 aaPredicted RBP17.42■□□□□ 0.38
COL9A1-201ENST00000320755 KCNQ1P51787 676 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 TMEM102Q8N9M5 508 aaPredicted RBP17.42■□□□□ 0.38
COL9A1-201ENST00000320755 CIB1Q99828 191 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 DNAJC15Q9Y5T4 150 aa17.42■□□□□ 0.38
COL9A1-201ENST00000320755 MANSC4A6NHS7 340 aaPredicted RBP17.41■□□□□ 0.38
COL9A1-201ENST00000320755 ZNF839A8K0R7 811 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 WASH4PA8MWX3 477 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 H3BMM5 538 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 FMO4P31512 558 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 GRB7Q14451 532 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 NFE2Q16621 373 aaPredicted RBP17.41■□□□□ 0.38
COL9A1-201ENST00000320755 ZNF598Q86UK7 904 aaKnown RBP17.41■□□□□ 0.38
COL9A1-201ENST00000320755 HERC6Q8IVU3 1022 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 NAT14Q8WUY8 206 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 SLC25A23Q9BV35 468 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 UTP6Q9NYH9 597 aaKnown RBP17.41■□□□□ 0.38
COL9A1-201ENST00000320755 TSR3Q9UJK0 312 aaKnown RBP17.41■□□□□ 0.38
COL9A1-201ENST00000320755 A0A0U1RQS6 177 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 TPST1O60507 370 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 SRP72O76094 671 aaKnown RBP17.41■□□□□ 0.38
COL9A1-201ENST00000320755 SMIM18P0DKX4 95 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 ELNP15502 786 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 CHRM3P20309 590 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 PBX3P40426 434 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 HERVK_113P63132 956 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 MYBPC1Q00872 1141 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 CAPRIN1Q14444 709 aaKnown RBP17.41■□□□□ 0.38
COL9A1-201ENST00000320755 MTX3Q5HYI7 312 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 SCIMPQ6UWF3 145 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 CATSPER1Q8NEC5 780 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 ESAMQ96AP7 390 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 TUBGCP3Q96CW5 907 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 RMDN1Q96DB5 314 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 ERVK-6Q9BXR3 956 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 POLR1EQ9GZS1 481 aaKnown RBP17.41■□□□□ 0.38
COL9A1-201ENST00000320755 SEMA4BQ9NPR2 832 aaPredicted RBP17.41■□□□□ 0.38
COL9A1-201ENST00000320755 EGFL7Q9UHF1 273 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 A0A1B0GTL3 188 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 A0A1B0GVG6 124 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 PIP5K1BO14986 540 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 TIPRLO75663 272 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 CDK14O94921 469 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 PABPC4LP0CB38 370 aaKnown RBP17.41■□□□□ 0.38
COL9A1-201ENST00000320755 CD1DP15813 335 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 GRIA3P42263 894 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 RPS6KA2Q15349 733 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 RBM44Q6ZP01 1051 aaKnown RBP17.41■□□□□ 0.38
COL9A1-201ENST00000320755 LARP4Q71RC2 724 aaKnown RBP eCLIP17.41■□□□□ 0.38
COL9A1-201ENST00000320755 FUNDC1Q8IVP5 155 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 LGI2Q8N0V4 545 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 OR7D4Q8NG98 312 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 HCSTQ9UBK5 93 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 RAB26Q9ULW5 256 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 AURKCQ9UQB9 309 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms