RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 NANOGP8Q6NSW7 305 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 C16orf89Q6UX73 402 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 DNAJC14Q6Y2X3 702 aaPredicted RBP15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 IGSF8Q969P0 613 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 CCDC97Q96F63 343 aaPredicted RBP15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 COX4I2Q96KJ9 171 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 ZNF597Q96LX8 424 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 CRISPLD1Q9H336 500 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 MYRFQ9Y2G1 1151 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 CRYL1Q9Y2S2 319 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 PCDHB12Q9Y5F1 795 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 TDRD15B5MCY1 1934 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 MAGEB16A2A368 324 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 KCNU1A8MYU2 1149 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 PSMD12O00232 456 aaPredicted RBP15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 IGHA2P01877 340 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 RPL17P18621 184 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 ME2P23368 584 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 NAB1Q13506 487 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 GPR180Q86V85 440 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 FIBCD1Q8N539 461 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 RTL3Q8N8U3 475 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 PHF21BQ96EK2 531 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 EXOC2Q96KP1 924 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 NPAS2Q99743 824 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 NEURL2Q9BR09 285 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 RHOJQ9H4E5 214 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 NOL6Q9H6R4 1146 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 WDR41Q9HAD4 459 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 ACOT9Q9Y305 439 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 IGLV3-25P01717 112 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 ZNF24P17028 368 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 MLLT6P55198 1093 aaPredicted RBP15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 NUP107P57740 925 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 DUSP4Q13115 394 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 DCDC5Q6ZRR9 648 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 SLC24A5Q71RS6 500 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 RNF180Q86T96 592 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 ZNF598Q86UK7 904 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 CENPLQ8N0S6 344 aaPredicted RBP15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 TMA16Q96EY4 203 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 CIB1Q99828 191 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 KIFC1Q9BW19 673 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 CCSER2Q9H7U1 834 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 CBFA2T3O75081 653 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 MPOP05164 745 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 IDO1P14902 403 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 STMN1P16949 149 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 ACVRL1P37023 503 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 BRMS1LQ5PSV4 323 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 FAM110BQ8TC76 370 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 RMND5BQ96G75 393 aaPredicted RBP15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 SERPINB11Q96P15 392 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 GTSE1Q9NYZ3 720 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 ZDHHC2Q9UIJ5 367 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 RAD54BQ9Y620 910 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 K7EPI3 171 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 IHHQ14623 411 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 INSCQ1MX18 579 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 PDCD4Q53EL6 469 aaKnown RBP15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 MTX3Q5HYI7 312 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 MS4A13Q5J8X5 152 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 MARC1Q5VT66 337 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 NEPROQ6NW34 567 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 FBXL22Q6P050 247 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 BLOC1S5Q8TDH9 187 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 SREK1Q8WXA9 508 aaKnown RBP15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 BHMTQ93088 406 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 FCRL5Q96RD9 977 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 NACA2Q9H009 215 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 FBXO5Q9UKT4 447 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 TCAF1Q9Y4C2 921 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 TLL2Q9Y6L7 1015 aa15.58■□□□□ 0.08
SHROOM1-201ENST00000319854 HTR3EA5X5Y0 456 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 GNAO1P09471 354 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 CKMT2P17540 419 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 GEMP55040 296 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 PRAMEP78395 509 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 KRT80Q6KB66 452 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 RSPO2Q6UXX9 243 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 MON1AQ86VX9 555 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 TMEM173Q86WV6 379 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 SH3RF2Q8TEC5 729 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 DPF3Q92784 378 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 CYP2S1Q96SQ9 504 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 IL12RB2Q99665 862 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 GPR22Q99680 433 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 SPON2Q9BUD6 331 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 ILKAPQ9H0C8 392 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 UPF3AQ9H1J1 476 aaKnown RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 FAM96AQ9H5X1 160 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 MARCH2Q9P0N8 246 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 UXTQ9UBK9 157 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 ADAM28Q9UKQ2 775 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 PCDHB8Q9UN66 801 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 TET1Q8NFU7 2136 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 FGF10O15520 208 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 ZBTB11O95625 1053 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 SBK3P0C264 359 aa15.57■□□□□ 0.08
SHROOM1-201ENST00000319854 KCNQ1P51787 676 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms