RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 IGSF9Q9P2J2 1179 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 IPPQ9Y573 584 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 CEPT1Q9Y6K0 416 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.54□□□□□ -1.2
CDHR3-201ENST00000317716 ATG7O95352 703 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 SLC2A4P14672 509 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 CPB1P15086 417 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 CD1EP15812 388 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 TTKP33981 857 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 GRK3P35626 688 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 CPOXP36551 454 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 CHRNA4P43681 627 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 FLT3LGP49771 235 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 ST13P50502 369 aaKnown RBP7.54□□□□□ -1.2
CDHR3-201ENST00000317716 BMXP51813 675 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 LIMK2P53671 638 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 OXCT1P55809 520 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 RAB10P61026 200 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF829Q3KNS6 432 aaPredicted RBP7.54□□□□□ -1.2
CDHR3-201ENST00000317716 NOMO2Q5JPE7 1267 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 C4orf22Q6V702 233 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 C14orf80Q86SX3 495 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 PQLC3Q8N755 202 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 SCAIQ8N9R8 606 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 C7orf57Q8NEG2 295 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 ST13P5Q8NFI4 369 aaPredicted RBP7.54□□□□□ -1.2
CDHR3-201ENST00000317716 TSPAN17Q96FV3 270 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 FAM167AQ96KS9 214 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 MRPL45Q9BRJ2 306 aaKnown RBP7.54□□□□□ -1.2
CDHR3-201ENST00000317716 WDR83Q9BRX9 315 aaKnown RBP7.54□□□□□ -1.2
CDHR3-201ENST00000317716 COPS4Q9BT78 406 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 BEX2Q9BXY8 128 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 CDT1Q9H211 546 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 IMPAD1Q9NX62 359 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 RBPJLQ9UBG7 517 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 CYTH4Q9UIA0 394 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 FBXO5Q9UKT4 447 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 BTBD3Q9Y2F9 522 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 FER1L6Q2WGJ9 1857 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 DOCK3Q8IZD9 2030 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 FAM159BA6NKW6 160 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 C9IYK1 514 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 H3BNH8 94 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 SNAP91O60641 907 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 SMIM18P0DKX4 95 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 FCGR1AP12314 374 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 TKTP29401 623 aaKnown RBP7.54□□□□□ -1.2
CDHR3-201ENST00000317716 FMO3P31513 532 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 GJA9P57773 515 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 MTPNP58546 118 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 ECT2LQ008S8 904 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 CLCQ05315 142 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 LIPEQ05469 1076 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF235Q14590 738 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 TTLL4Q14679 1199 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 MEP1AQ16819 746 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 GPR158Q5T848 1215 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 FAM219BQ5XKK7 198 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 EPGNQ6UW88 154 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 PIWIL4Q7Z3Z4 852 aaKnown RBP7.54□□□□□ -1.2
CDHR3-201ENST00000317716 TAGAPQ8N103 731 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 TERB1Q8NA31 727 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 HEXDCQ8WVB3 486 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 PHF21AQ96BD5 680 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 TPD52L3Q96J77 140 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 COQ3Q9NZJ6 369 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 CACNG4Q9UBN1 327 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 TUBGCP4Q9UGJ1 667 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF510Q9Y2H8 683 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 NOTOA8MTQ0 251 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 TMEM114B3SHH9 223 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 PFDN6O15212 129 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 DLX3O60479 287 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 BCAS2O75934 225 aaPredicted RBP7.54□□□□□ -1.2
CDHR3-201ENST00000317716 USP17L7P0C7H9 530 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 DHRS4L1P0CG22 281 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 IST1P53990 364 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 VBP1P61758 197 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 SP3Q02447 781 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 CD300CQ08708 224 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 CCDC142Q17RM4 750 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 TEX44Q53QW1 395 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 ZRANB3Q5FWF4 1079 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 SPANXN2Q5MJ10 180 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 HIPK1Q86Z02 1210 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 IFNL1Q8IU54 200 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 WDTC1Q8N5D0 677 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 C1orf127Q8N9H9 656 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 AFG1LQ8WV93 481 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 SNX19Q92543 992 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 PROX1Q92786 737 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 FAM120BQ96EK7 910 aaKnown RBP7.54□□□□□ -1.2
CDHR3-201ENST00000317716 FAR2Q96K12 515 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF778Q96MU6 729 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 MUS81Q96NY9 551 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 AP5M1Q9H0R1 490 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 ARHGAP28Q9P2N2 729 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 SLC27A5Q9Y2P5 690 aa7.54□□□□□ -1.2
CDHR3-201ENST00000317716 ATP8B3O60423 1300 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 PRORSD1PA6NEY8 169 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms