RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 SLC9A7Q96T83 725 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 XPNPEP1Q9NQW7 623 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 VPS4AQ9UN37 437 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 PIPSLA2A3N6 862 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 TRIM38O00635 465 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 TSPAN8P19075 237 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 GRIA3P42263 894 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 IDH2P48735 452 aaKnown RBP11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 EIF3MQ7L2H7 374 aaKnown RBP11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 CMC1Q7Z7K0 106 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 OR8H2Q8N162 312 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 NETO2Q8NC67 525 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 PCED1BQ96HM7 432 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 FUBP3Q96I24 572 aaKnown RBP eCLIP11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 GAS2L1Q99501 681 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 SLC25A51Q9H1U9 297 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 FZD8Q9H461 694 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 CLIC5Q9NZA1 410 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 C3orf18Q9UK00 162 aa11.98□□□□□ -0.49
AMBRA1-201ENST00000314845 DYTNA2CJ06 578 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 SERPINB7O75635 380 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 INHAP05111 366 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 SERPINA6P08185 405 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 HNRNPLP14866 589 aaKnown RBP eCLIP11.97□□□□□ -0.492e-12■□□□□ 8.8
AMBRA1-201ENST00000314845 ZNF24P17028 368 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 CDKN2BP42772 138 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 AP1S1P61966 158 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 TRAF7Q6Q0C0 670 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 SCIMPQ6UWF3 145 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 DSELQ8IZU8 1212 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 C8orf59Q8N0T1 100 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 DBF4BQ8NFT6 615 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 MOSPD2Q8NHP6 518 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 QKIQ96PU8 341 aaKnown RBP eCLIP11.97□□□□□ -0.493e-8■■■■□ 20.8
AMBRA1-201ENST00000314845 KCTD15Q96SI1 283 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 ZNF184Q99676 751 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 IMP3Q9NV31 184 aaKnown RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 INTS7Q9NVH2 962 aaKnown RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 EVLQ9UI08 416 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 PNMA8CA0A1B0GUJ8 204 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 ATG13O75143 517 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 ERN1O75460 977 aaKnown RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 LRIG2O94898 1065 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 PSMG1O95456 288 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 TSPAN19P0C672 248 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 WARSP23381 471 aaKnown RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 SPAM1P38567 509 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 PBX3P40426 434 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 ST13P50502 369 aaKnown RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 CCR3P51677 355 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 KIAA0408Q6ZU52 694 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 GET4Q7L5D6 327 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 CLIP3Q96DZ5 547 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 H3BM21 787 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 CCL16O15467 120 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 AP2A1O95782 977 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 PTPN2P17706 415 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 CDH13P55290 713 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 SLC25A3Q00325 362 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 C16orf72Q14CZ0 275 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 SLC10A6Q3KNW5 377 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 ARMC4Q5T2S8 1044 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 SLC44A1Q8WWI5 657 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 ITCHQ96J02 903 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 TTLL2Q9BWV7 592 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 NEK6Q9HC98 313 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 RPRD1BQ9NQG5 326 aaKnown RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 RBPJLQ9UBG7 517 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 ERVW-1Q9UQF0 538 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 TRAF6Q9Y4K3 522 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 ATP6AP2A0A1C7CYW4 349 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 CCDC85CA6NKD9 419 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 RFXANKO14593 260 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 ATP6AP2O75787 350 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 C22orf31O95567 290 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 HOXB6P17509 224 aaKnown RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 EPHA3P29320 983 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 SLC20A2Q08357 652 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 COL9A3Q14050 684 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 TOMM20Q15388 145 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 GPAT3Q53EU6 434 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 RNASEH2BQ5TBB1 312 aaKnown RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 RHBDF2Q6PJF5 856 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 CHST9Q7L1S5 443 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 ZCCHC7Q8N3Z6 543 aaKnown RBP11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 OR10G6Q8NH81 332 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 MARK4Q96L34 752 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 TRAPPC9Q96Q05 1148 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 OLFM1Q99784 485 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 GBA3Q9H227 469 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 LRRC4CQ9HCJ2 640 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 ARHGEF4Q9NR80 690 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 DMAC2Q9NW81 257 aa11.97□□□□□ -0.49
AMBRA1-201ENST00000314845 MED1Q15648 1581 aaPredicted RBP11.96□□□□□ -0.49
AMBRA1-201ENST00000314845 CHURC1-FNTBB4DL54 471 aa11.96□□□□□ -0.49
AMBRA1-201ENST00000314845 DDX3YO15523 660 aaKnown RBP11.96□□□□□ -0.49
AMBRA1-201ENST00000314845 NOL4O94818 638 aa11.96□□□□□ -0.49
AMBRA1-201ENST00000314845 IDSP22304 550 aa11.96□□□□□ -0.49
AMBRA1-201ENST00000314845 NUP62P37198 522 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms