RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 FAM20BO75063 409 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 TFE3P19532 575 aaPredicted RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 GRM5P41594 1212 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 ADGRE1Q14246 886 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SEMA3AQ14563 771 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF829Q3KNS6 432 aaPredicted RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 TEX44Q53QW1 395 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SULT1C3Q6IMI6 304 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 MILR1Q7Z6M3 343 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 GALNT7Q86SF2 657 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 SLC45A3Q96JT2 553 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 MTG1Q9BT17 334 aaPredicted RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 HERC2P3Q9BVR0 1158 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 UNKQ9C0B0 810 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 ADARB2Q9NS39 739 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 MRTO4Q9UKD2 239 aaKnown RBP8.84□□□□□ -0.99
COL6A5-202ENST00000312481 DUSP12Q9UNI6 340 aa8.84□□□□□ -0.99
COL6A5-202ENST00000312481 C1orf232A0A0U1RR37 186 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 H3BRB1 525 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 NOL4O94818 638 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 SP100P23497 879 aaPredicted RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 L1CAMP32004 1257 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 MAGEA8P43361 318 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 SRSF11Q05519 484 aaKnown RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 NR1D2Q14995 579 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 ACO2Q99798 780 aaKnown RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 TUT1Q9H6E5 874 aaKnown RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 ENTPD4Q9Y227 616 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 SKAP2O75563 359 aaPredicted RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 PIGNO95427 931 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 GNAZP19086 355 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 PBX3P40426 434 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 CBWD6Q4V339 395 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 CBWD3Q5JTY5 395 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 CBWD5Q5RIA9 395 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 C17orf50Q8WW18 174 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 BTN2A3PQ96KV6 586 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 COQ7Q99807 217 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 BCS1LQ9Y276 419 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 TRAF6Q9Y4K3 522 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 GPC6Q9Y625 555 aaPredicted RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 NTSP30990 170 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 ABL2P42684 1182 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 RAB2AP61019 212 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 SEMA5AQ13591 1074 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 C10orf120Q5SQS8 335 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 DSELQ8IZU8 1212 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 LRRC17Q8N6Y2 441 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 COPS7BQ9H9Q2 264 aaPredicted RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 KCNE2Q9Y6J6 123 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 SUV39H1O43463 412 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 GSTT2BP0CG30 244 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 TFEBP19484 476 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 IL5RAQ01344 420 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 SLC18A2Q05940 514 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 VPS26BQ4G0F5 336 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 IRAK1BP1Q5VVH5 260 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 MON1AQ86VX9 555 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 ATG4AQ8WYN0 398 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 DEFB129Q9H1M3 183 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 SLC25A51Q9H1U9 297 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 SARS2Q9NP81 518 aaKnown RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 IRAK2O43187 625 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 PMPCBO75439 489 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 LYNP07948 512 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 ACSM2AQ08AH3 577 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 PRKD1Q15139 912 aaPredicted RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 ACSM2BQ68CK6 577 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 ZNF248Q8NDW4 579 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 UBAP1Q9NZ09 502 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 ACTR3BQ9P1U1 418 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 SRP68Q9UHB9 627 aaKnown RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 PCDHGB7Q9Y5F8 929 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 ORC5O43913 435 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 SERPINA1P01009 418 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 NDST1P52848 882 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 PLK1P53350 603 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 ADIGQ0VDE8 80 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 STK32CQ86UX6 486 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 CPNE2Q96FN4 548 aaPredicted RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 VAPBO95292 243 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 SSTR1P30872 391 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 TLX1P31314 330 aaPredicted RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 FAAP100Q0VG06 881 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 CCDC149Q6ZUS6 474 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 CMASQ8NFW8 434 aaPredicted RBP8.83□□□□□ -1
COL6A5-202ENST00000312481 HGH1Q9BTY7 390 aa8.83□□□□□ -1
COL6A5-202ENST00000312481 GNG14A0A1W2PPG7 69 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 C8GP07360 202 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 TSPAN19P0C672 248 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 GSTM3P21266 225 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 SLC6A2P23975 617 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 UBE3AQ05086 875 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 PLET1Q6UQ28 207 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 HJURPQ8NCD3 748 aaPredicted RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 TMEM169Q96HH4 297 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 HINFPQ9BQA5 517 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 SNX15Q9NRS6 342 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 PTTG3PQ9NZH4 202 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 OR12D3Q9UGF7 316 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms