RNA–Protein interactions for RNA: ENST00000311008.15

SPNS1-201, Transcript of sphingolipid transporter 1 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS1, Length 2,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-201ENST00000311008 LARP4Q71RC2 724 aaKnown RBP eCLIP19.57■□□□□ 0.722e-6■■□□□ 11.8
SPNS1-201ENST00000311008 ABI1Q8IZP0 508 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 PHC3Q8NDX5 983 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 OR4L1Q8NH43 312 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 DNAJC1Q96KC8 554 aaKnown RBP19.57■□□□□ 0.72
SPNS1-201ENST00000311008 GLT1D1Q96MS3 346 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 TFB2MQ9H5Q4 396 aaKnown RBP19.57■□□□□ 0.72
SPNS1-201ENST00000311008 ELAC1Q9H777 363 aaKnown RBP19.57■□□□□ 0.72
SPNS1-201ENST00000311008 TNFRSF12AQ9NP84 129 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 PCNTO95613 3336 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 CCDC162PA2VCL2 907 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 MTMR11A4FU01 709 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 OR51F1A6NGY5 319 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 CAPN8A6NHC0 703 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 STX16-NPEPL1H3BU86 382 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 CCL22O00626 93 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 CRTAMO95727 393 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 MBTPS1Q14703 1052 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 EGFL6Q8IUX8 553 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 C19orf60Q96EN9 201 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 SYTL2Q9HCH5 934 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 SPAG4Q9NPE6 437 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 CNOT11Q9UKZ1 510 aaKnown RBP19.57■□□□□ 0.72
SPNS1-201ENST00000311008 ARL5AQ9Y689 179 aa19.57■□□□□ 0.72
SPNS1-201ENST00000311008 H7C4K7 107 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 TXNDC9O14530 226 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 UBFD1O14562 309 aaKnown RBP19.56■□□□□ 0.72
SPNS1-201ENST00000311008 ZNF37AP17032 561 aaPredicted RBP19.56■□□□□ 0.72
SPNS1-201ENST00000311008 PMLP29590 882 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 NAA20P61599 178 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 TYSND1Q2T9J0 566 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 NADSYN1Q6IA69 706 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 ZNF549Q6P9A3 640 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 PIM3Q86V86 326 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 SPATA24Q86W54 205 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 CIR1Q86X95 450 aaPredicted RBP19.56■□□□□ 0.72
SPNS1-201ENST00000311008 TICAM1Q8IUC6 712 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 RNF148Q8N7C7 305 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 HMGCLL1Q8TB92 370 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 PTERQ96BW5 349 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 GCNAQ96QF7 691 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 SEPT5Q99719 369 aaPredicted RBP19.56■□□□□ 0.72
SPNS1-201ENST00000311008 MGME1Q9BQP7 344 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 SLC24A3Q9HC58 644 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 CCDC167Q9P0B6 97 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 SEPT3Q9UH03 358 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 BBIP1A8MTZ0 92 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 NRP2O60462 931 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 TLR5O60602 858 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 SLC4A1P02730 911 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 KCNC1P48547 511 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 STC1P52823 247 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 ARPP19P56211 112 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 ELAVL2Q12926 359 aaKnown RBP19.56■□□□□ 0.72
SPNS1-201ENST00000311008 FOXB2Q5VYV0 432 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 SLC30A9Q6PML9 568 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 MFN1Q8IWA4 741 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 OR52K2Q8NGK3 314 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 ROPN1LQ96C74 230 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 AARSD1Q9BTE6 412 aaKnown RBP19.56■□□□□ 0.72
SPNS1-201ENST00000311008 COPS7BQ9H9Q2 264 aaPredicted RBP19.56■□□□□ 0.72
SPNS1-201ENST00000311008 TBC1D30Q9Y2I9 924 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 SLC27A5Q9Y2P5 690 aa19.56■□□□□ 0.72
SPNS1-201ENST00000311008 ARIH1Q9Y4X5 557 aaPredicted RBP19.56■□□□□ 0.72
SPNS1-201ENST00000311008 TMEM88BA6NKF7 163 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 MUSKO15146 869 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 TRIM24O15164 1050 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 ALDH1A1P00352 501 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 ALDH2P05091 517 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 C8BP07358 591 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 PPP1R3AQ16821 1122 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 LIN52Q52LA3 116 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 SAMD4BQ5PRF9 694 aaKnown RBP19.55■□□□□ 0.72
SPNS1-201ENST00000311008 UGT2A3Q6UWM9 527 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 LGI2Q8N0V4 545 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 TCF12Q99081 682 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 PAPOLBQ9NRJ5 636 aaKnown RBP19.55■□□□□ 0.72
SPNS1-201ENST00000311008 NLE1Q9NVX2 485 aaPredicted RBP19.55■□□□□ 0.72
SPNS1-201ENST00000311008 POLR3BQ9NW08 1133 aaPredicted RBP19.55■□□□□ 0.72
SPNS1-201ENST00000311008 CROTQ9UKG9 612 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 CASP8AP2Q9UKL3 1982 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 E7ENX8 843 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 FBP2O00757 339 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 MRASO14807 208 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 CES1P23141 567 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 MSX2P35548 267 aaPredicted RBP19.55■□□□□ 0.72
SPNS1-201ENST00000311008 UGT3A2Q3SY77 523 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 RPS27LQ71UM5 84 aaKnown RBP19.55■□□□□ 0.72
SPNS1-201ENST00000311008 PCDH20Q8N6Y1 951 aaKnown RBP19.55■□□□□ 0.72
SPNS1-201ENST00000311008 PTGR2Q8N8N7 351 aaPredicted RBP19.55■□□□□ 0.72
SPNS1-201ENST00000311008 PCYOX1LQ8NBM8 494 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 CEP295NLQ96MC4 621 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 TRIB3Q96RU7 358 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 GPR62Q9BZJ7 368 aa19.55■□□□□ 0.72
SPNS1-201ENST00000311008 ENO4A6NNW6 628 aa19.54■□□□□ 0.72
SPNS1-201ENST00000311008 SOAT2O75908 522 aa19.54■□□□□ 0.72
SPNS1-201ENST00000311008 SRP72O76094 671 aaKnown RBP19.54■□□□□ 0.72
SPNS1-201ENST00000311008 CDH4P55283 916 aa19.54■□□□□ 0.72
SPNS1-201ENST00000311008 TIAL1Q01085 375 aaKnown RBP eCLIP19.54■□□□□ 0.72
SPNS1-201ENST00000311008 GNA12Q03113 381 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms