RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 VPS26BQ4G0F5 336 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 TMPRSS11AQ6ZMR5 421 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 ZNF662Q6ZS27 426 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 MTMR9Q96QG7 549 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 PRRG4Q9BZD6 226 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 HCN3Q9P1Z3 774 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 GMPPBQ9Y5P6 360 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 IRF6O14896 467 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 PSMD10O75832 226 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 MYBPC1Q00872 1141 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 GALNT3Q14435 633 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 CERS6Q6ZMG9 384 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 GALNT13Q8IUC8 556 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 VPS35Q96QK1 796 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 CACNA2D1P54289 1103 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 FAAP100Q0VG06 881 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 DPYSQ14117 519 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 FAM153CQ494X1 144 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 CNSTQ6PJW8 725 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 BTN2A1Q7KYR7 527 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 CDH24Q86UP0 819 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 ZNF563Q8TA94 476 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 ACSS3Q9H6R3 686 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 ELL3Q9HB65 397 aaPredicted RBP11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 DNAAF2Q9NVR5 837 aaKnown RBP11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 DAPK2Q9UIK4 370 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 RPL26L1Q9UNX3 145 aaKnown RBP11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 TMEM88BA6NKF7 163 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 MPZL2O60487 215 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 SLC22A3O75751 556 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 ADSSP30520 456 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 SPIBQ01892 262 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 LARS2Q15031 903 aaKnown RBP11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 RAP1GAP2Q684P5 730 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 CYP2R1Q6VVX0 501 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 ATCAYQ86WG3 371 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 TSPAN14Q8NG11 270 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 OR52E6Q96RD3 313 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 TLR10Q9BXR5 811 aa11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 ACE2Q9BYF1 805 aaPredicted RBP11.33□□□□□ -0.6
VCPIP1-201ENST00000310421 TBC1D3DA0A087WVF3 549 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 TBC1D3IA0A087WXS9 549 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 TBC1D3EA0A087X179 549 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 TBC1D3KA0A087X1G2 549 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 CCDC162PA2VCL2 907 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 TBC1D3FA6NER0 549 aaPredicted RBP11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 TBC1D3LB9A6J9 549 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 TLR5O60602 858 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 TBC1D3HP0C7X1 549 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 CBX5P45973 191 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 TBC1D3GQ6DHY5 549 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 TBC1D3CQ6IPX1 549 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 RTL4Q6ZR62 310 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 SLC41A1Q8IVJ1 513 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 TBC1D3Q8IZP1 549 aaPredicted RBP11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 TTC29Q8NA56 475 aaPredicted RBP11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 CLIP3Q96DZ5 547 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 SLC47A1Q96FL8 570 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 RSPH9Q9H1X1 276 aaPredicted RBP11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 RASSF1Q9NS23 344 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 UBIAD1Q9Y5Z9 338 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 CLDN4O14493 209 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 CHN2P52757 468 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 GMFBP60983 142 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 VBP1P61758 197 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 SLC24A5Q71RS6 500 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 STK32AQ8WU08 396 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 NMD3Q96D46 503 aaKnown RBP11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 QKIQ96PU8 341 aaKnown RBP eCLIP11.32□□□□□ -0.63e-7■■■□□ 18.4
VCPIP1-201ENST00000310421 CDADC1Q9BWV3 514 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 PIK3C2AO00443 1686 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 PTGES3LE9PB15 166 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 OR10H3O60404 316 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 IPO13O94829 963 aaKnown RBP11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 ABL2P42684 1182 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 RIPOR3Q96MK2 946 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 L1RE1Q9UN81 338 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 ALOX12P18054 663 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 MANFP55145 182 aaKnown RBP11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 RAB25P57735 213 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 DNAJB7Q7Z6W7 309 aaPredicted RBP11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 FAM35AQ86V20 835 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 RANBP3LQ86VV4 465 aaPredicted RBP11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 LINGO1Q96FE5 620 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 MFSD14AQ96MC6 490 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 RAB11FIP5Q9BXF6 653 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 RHOJQ9H4E5 214 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 RAB21Q9UL25 225 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 ASF1AQ9Y294 204 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 RGPD1P0DJD0 1748 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 CNTNAP1P78357 1384 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 ASTN1O14525 1302 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 ABCC6O95255 1503 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 NUP188Q5SRE5 1749 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 TRBC1P01850 177 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 PROCP04070 461 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 RPL38P63173 70 aaKnown RBP11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 XIAPP98170 497 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 PTPRNQ16849 979 aa11.32□□□□□ -0.6
VCPIP1-201ENST00000310421 PDCD10Q9BUL8 212 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms