RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 TRMT13Q9NUP7 481 aaKnown RBP9.31□□□□□ -0.92
XCR1-201ENST00000309285 FAM105AQ9NUU6 356 aa9.31□□□□□ -0.92
XCR1-201ENST00000309285 PSMD13Q9UNM6 376 aa9.31□□□□□ -0.92
XCR1-201ENST00000309285 PCDHB12Q9Y5F1 795 aa9.31□□□□□ -0.92
XCR1-201ENST00000309285 TMEM63AO94886 807 aa9.31□□□□□ -0.92
XCR1-201ENST00000309285 PROZP22891 400 aa9.31□□□□□ -0.92
XCR1-201ENST00000309285 CDH5P33151 784 aaPredicted RBP9.31□□□□□ -0.92
XCR1-201ENST00000309285 ATP12AP54707 1039 aa9.31□□□□□ -0.92
XCR1-201ENST00000309285 MRPS6P82932 125 aaKnown RBP9.31□□□□□ -0.92
XCR1-201ENST00000309285 COX10Q12887 443 aa9.31□□□□□ -0.92
XCR1-201ENST00000309285 PHC3Q8NDX5 983 aa9.31□□□□□ -0.92
XCR1-201ENST00000309285 PCDH19Q8TAB3 1148 aa9.31□□□□□ -0.92
XCR1-201ENST00000309285 ZHX1-C8orf76Q96EF9 292 aa9.31□□□□□ -0.92
XCR1-201ENST00000309285 HDHD2Q9H0R4 259 aa9.31□□□□□ -0.92
XCR1-201ENST00000309285 MAN1C1Q9NR34 630 aa9.31□□□□□ -0.92
XCR1-201ENST00000309285 UBA2Q9UBT2 640 aaPredicted RBP9.31□□□□□ -0.92
XCR1-201ENST00000309285 RUVBL2Q9Y230 463 aaKnown RBP9.31□□□□□ -0.92
XCR1-201ENST00000309285 MRASO14807 208 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 HOXA2O43364 376 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 HS6ST1O60243 411 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 SH3BGRLO75368 114 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 COX4I1P13073 169 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 MGAT1P26572 445 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 KPNA1P52294 538 aaPredicted RBP9.3□□□□□ -0.92
XCR1-201ENST00000309285 DENND5AQ6IQ26 1287 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 TMEM214Q6NUQ4 689 aaKnown RBP9.3□□□□□ -0.92
XCR1-201ENST00000309285 SLC26A9Q7LBE3 791 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 FAR1Q8WVX9 515 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 CSPG4P5Q96PW8 444 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 APBA2Q99767 749 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 C12orf65Q9H3J6 166 aaKnown RBP9.3□□□□□ -0.92
XCR1-201ENST00000309285 CCDC59Q9P031 241 aaKnown RBP9.3□□□□□ -0.92
XCR1-201ENST00000309285 EVPLQ92817 2033 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 UBDO15205 165 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 KPNA6O60684 536 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 EPN2O95208 641 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 IVDP26440 423 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 AGAP9Q5VTM2 703 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 VN1R5Q7Z5H4 357 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 KRT78Q8N1N4 520 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 PYROXD2Q8N2H3 581 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 SLC4A5Q9BY07 1137 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 DUSP16Q9BY84 665 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 GPAMQ9HCL2 828 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 SCUBE2Q9NQ36 999 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 GNG14A0A1W2PPG7 69 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 EFCAB10A6NFE3 127 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 MAGEB3O15480 346 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 OR6B1O95007 311 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 CD52P31358 61 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 HALP42357 657 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 MRPS5P82675 430 aaKnown RBP9.3□□□□□ -0.92
XCR1-201ENST00000309285 ALDH6A1Q02252 535 aaKnown RBP9.3□□□□□ -0.92
XCR1-201ENST00000309285 VAC14Q08AM6 782 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 CSHL1Q14406 222 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 GRB14Q14449 540 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 SMARCD1Q96GM5 515 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 MARK4Q96L34 752 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 CIB1Q99828 191 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 CHMP1AQ9HD42 196 aaPredicted RBP9.3□□□□□ -0.92
XCR1-201ENST00000309285 KLHL3Q9UH77 587 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 TCRBV7S3A2A0A539 114 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 UGT1A9O60656 530 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 MLNP12872 115 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 UGT1A6P19224 532 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 ITGALP20701 1170 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 UGT1A1P22309 533 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 UGT1A4P22310 534 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 POU1F1P28069 291 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 CCR1P32246 355 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 UGT1A3P35503 534 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 UGT1A5P35504 534 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 RABGGTBP53611 331 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 GNA12Q03113 381 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 ALFQ53S48 1182 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 MTX3Q5HYI7 312 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 SULT1C3Q6IMI6 304 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 C8orf59Q8N0T1 100 aaPredicted RBP9.3□□□□□ -0.92
XCR1-201ENST00000309285 SVOPQ8N4V2 548 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 AMER2Q8N7J2 671 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 NAT9Q9BTE0 207 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 UGT1A7Q9HAW7 530 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 UGT1A10Q9HAW8 530 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 UGT1A8Q9HAW9 530 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 FBXO10Q9UK96 956 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 GTF2A1LQ9UNN4 478 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 NR2E3Q9Y5X4 410 aa9.3□□□□□ -0.92
XCR1-201ENST00000309285 A0A0A0MRY4 1105 aa9.29□□□□□ -0.92
XCR1-201ENST00000309285 CLDN25C9JDP6 229 aa9.29□□□□□ -0.92
XCR1-201ENST00000309285 FBP2O00757 339 aa9.29□□□□□ -0.92
XCR1-201ENST00000309285 TOR1BO14657 336 aa9.29□□□□□ -0.92
XCR1-201ENST00000309285 NDUFV1P49821 464 aa9.29□□□□□ -0.92
XCR1-201ENST00000309285 EPS8Q12929 822 aa9.29□□□□□ -0.92
XCR1-201ENST00000309285 ZSWIM7Q19AV6 140 aa9.29□□□□□ -0.92
XCR1-201ENST00000309285 VSTM1Q6UX27 236 aa9.29□□□□□ -0.92
XCR1-201ENST00000309285 ATG16L2Q8NAA4 619 aa9.29□□□□□ -0.92
XCR1-201ENST00000309285 LPCAT1Q8NF37 534 aa9.29□□□□□ -0.92
XCR1-201ENST00000309285 SPATA13Q96N96 652 aa9.29□□□□□ -0.92
XCR1-201ENST00000309285 KCTD14Q9BQ13 255 aaPredicted RBP9.29□□□□□ -0.92
XCR1-201ENST00000309285 TKTL2Q9H0I9 626 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms