RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 FHDC1Q9C0D6 1143 aaPredicted RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 UBQLN3Q9H347 655 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 SLITRK6Q9H5Y7 841 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 ZBTB40Q9NUA8 1239 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 C20orf141Q9NUB4 165 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 CRIM1Q9NZV1 1036 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 MPP6Q9NZW5 540 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 ADAMTS6Q9UKP5 1117 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 PTPRJQ12913 1337 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 CEMIPQ8WUJ3 1361 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 SOWAHBA6NEL2 793 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 A8MXQ7 604 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 MDM4O15151 490 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 YKT6O15498 198 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 GPRIN2O60269 458 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 TPST2O60704 377 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 IL2RAP01589 272 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 LTA4HP09960 611 aaKnown RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 RFPL3SP0C7P2 107 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 PNLIPP16233 465 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 ATF4P18848 351 aaPredicted RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 PAX3P23760 479 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 MAGEA1P43355 309 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 SCNN1BP51168 640 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 PRMT2P55345 433 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 RPL11P62913 178 aaKnown RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 PFKPQ01813 784 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 ACY1Q03154 408 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 PPP1R8Q12972 351 aaKnown RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 SCGB2A2Q13296 93 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 ARHGAP19Q14CB8 494 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 STILQ15468 1287 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 STXBP2Q15833 593 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 DPYSL2Q16555 572 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 NKAIN1Q4KMZ8 207 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 C2CD6Q53TS8 623 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 C2orf27AQ580R0 203 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 ZNF628Q5EBL2 1059 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 DCAF10Q5QP82 559 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 C6orf10Q5SRN2 563 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 LIPMQ5VYY2 423 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 RAB12Q6IQ22 244 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 RINT1Q6NUQ1 792 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 HAUS6Q7Z4H7 955 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 POLNQ7Z5Q5 900 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 FAM124AQ86V42 546 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 DIS3L2Q8IYB7 885 aaKnown RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 PDIK1LQ8N165 341 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 OR13J1Q8NGT2 312 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 PPP1R14CQ8TAE6 165 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 PLEKHO2Q8TD55 490 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 ARHGAP45Q92619 1136 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 TMEM74Q96NL1 305 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 VAT1Q99536 393 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 GPR21Q99679 349 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 TRIM62Q9BVG3 475 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 ST6GALNAC5Q9BVH7 336 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 TMEM106CQ9BVX2 250 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 MXD3Q9BW11 206 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 IQCGQ9H095 443 aaKnown RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 MRPL46Q9H2W6 279 aaKnown RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 CHST11Q9NPF2 352 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 CCDC87Q9NVE4 849 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 UCKL1Q9NWZ5 548 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 CDKN2AIPQ9NXV6 580 aaPredicted RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 ASH2LQ9UBL3 628 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.26□□□□□ -2.21
CEP290-201ENST00000309041 PCDHA6Q9UN73 950 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 A0A087X0B3 334 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 C13orf42A0A1B0GVH6 325 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 MDFIC2A0A1B0GVS7 189 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 PRSS29PA6NIE9 313 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 NOTOA8MTQ0 251 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 CBX4O00257 560 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 TEX28O15482 410 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 CEP104O60308 925 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 FAM155BO75949 473 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 SFTPBP07988 381 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 IL1R1P14778 569 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 AOC1P19801 751 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 NR2F2P24468 414 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 GCAP28676 217 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 GKP32189 559 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 CASRP41180 1078 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 SLC9A3P48764 834 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 CCR4P51679 360 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 NEK3P51956 506 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 UBASH3AP57075 661 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 RELQ04864 619 aaPredicted RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 SOX4Q06945 474 aaPredicted RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 MAPRE2Q15555 327 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 KLHL40Q2TBA0 621 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 ZNF672Q499Z4 452 aaPredicted RBP1.26□□□□□ -2.21
CEP290-201ENST00000309041 ANKRD20A2Q5SQ80 823 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 ANKRD20A1Q5TYW2 823 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 ANKRD20A3Q5VUR7 823 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 KDM7AQ6ZMT4 941 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 MACC1Q6ZN28 852 aa1.26□□□□□ -2.21
CEP290-201ENST00000309041 KIAA1211Q6ZU35 1233 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms