RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 PCDH9Q9HC56 1237 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 KMT5AQ9NQR1 393 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 SEMA4GQ9NTN9 838 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 PARVAQ9NVD7 372 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 ADAM22Q9P0K1 906 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 IP6K2Q9UHH9 426 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 LNPEPQ9UIQ6 1025 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 CORO1CQ9ULV4 474 aaPredicted RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 LRRC42Q9Y546 428 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 INSL5Q9Y5Q6 135 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 PIAS3Q9Y6X2 628 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 MGAQ8IWI9 3026 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 PTPRBP23467 1997 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 KNTC1P50748 2209 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 EXOC1LA0A1B0GW35 172 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 TMEM191CA6NGB0 347 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 SLC38A8A6NNN8 435 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 HEPACAM2A8MVW5 462 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 TM9SF1O15321 606 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 LIASO43766 372 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 TYROBPO43914 113 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 SPAG6O75602 509 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 PAPSS2O95340 614 aaPredicted RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 TGDSO95455 350 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 C4BPAP04003 597 aaKnown RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 THBDP07204 575 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 KRT16P08779 473 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 OR4Q2P0C623 313 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 TMEM191BP0C7N4 346 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 RALAP11233 206 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 PSMC3P17980 439 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 ACO1P21399 889 aaKnown RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 CALB2P22676 271 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 PROZP22891 400 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 RRM1P23921 792 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 PTPN4P29074 926 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 FOXN2P32314 431 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 PHBP35232 272 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 ARPP19P56211 112 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 OSTNP61366 133 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 NOMO3P69849 1222 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 IRX1P78414 480 aaPredicted RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 CDK18Q07002 472 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 MGAT5Q09328 741 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 TWF1Q12792 350 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 BLMHQ13867 455 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 PIGHQ14442 188 aaPredicted RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 TEAD2Q15562 447 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 CSRP2Q16527 193 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 MAPK6Q16659 721 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 N4BP2L1Q5TBK1 243 aaPredicted RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 TMCO4Q5TGY1 634 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 ATF7IP2Q5U623 682 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 SLFN12LQ6IEE8 588 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 CGB2Q6NT52 195 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 ANKS3Q6ZW76 656 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 CENPUQ71F23 418 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 GAREM2Q75VX8 874 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 BZW1Q7L1Q6 419 aaKnown RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 RTL10Q7L3V2 364 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 POLNQ7Z5Q5 900 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 VSIG1Q86XK7 387 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 MFSD6LQ8IWD5 586 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 ZBTB8OSQ8IWT0 167 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 SRRM1Q8IYB3 904 aaKnown RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 ALLCQ8N6M5 410 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 CELF5Q8N6W0 485 aaKnown RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 NIPA2Q8N8Q9 360 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 ANKRD42Q8N9B4 389 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 BEST2Q8NFU1 509 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 TTC8Q8TAM2 541 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 UHMK1Q8TAS1 419 aaKnown RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 Q8TCH9 128 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 LRRC8CQ8TDW0 803 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 POMGNT1Q8WZA1 660 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 FAM3CQ92520 227 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 FAXDC2Q96IV6 333 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 LRRC37BQ96QE4 947 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 SMC6Q96SB8 1091 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 ACO2Q99798 780 aaKnown RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 TRMT61BQ9BVS5 477 aaKnown RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 FRMD8Q9BZ67 464 aaPredicted RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 HAPLN2Q9GZV7 340 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 KLHL25Q9H0H3 589 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 MMADHCQ9H3L0 296 aaPredicted RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 SMOC1Q9H4F8 434 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 TRABDQ9H4I3 376 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 DCLRE1BQ9H816 532 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 RNPEPL1Q9HAU8 725 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 CYP4F11Q9HBI6 524 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 ZFP14Q9HCL3 533 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 TRPV5Q9NQA5 729 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 ARHGAP28Q9P2N2 729 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 PSMC3IPQ9P2W1 217 aaPredicted RBP4.99□□□□□ -1.61
CKS1B-201ENST00000308987 GMEB2Q9UKD1 530 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 CROTQ9UKG9 612 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 PHTF1Q9UMS5 762 aa4.99□□□□□ -1.61
CKS1B-201ENST00000308987 ASH1LQ9NR48 2969 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TENM4Q6N022 2769 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 MYBPHLA2RUH7 354 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms