RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RPL26L1Q9UNX3 145 aaKnown RBP11.9□□□□□ -0.5
TRIM40-205ENST00000307859 HS3ST2Q9Y278 367 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 ACOT9Q9Y305 439 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 TRANK1O15050 2925 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 BRWD1Q9NSI6 2320 aa11.9□□□□□ -0.5
TRIM40-205ENST00000307859 A0A087X1B8 175 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 C2orf81A6NN90 581 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 HTRA2O43464 458 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 SOCS5O75159 536 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 PGLSO95336 258 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 IGSF6O95976 241 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 IL9P15248 144 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 LPOP22079 712 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 WEE1P30291 646 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 STX3Q13277 289 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 SPRED3Q2MJR0 410 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 FUT11Q495W5 492 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 ASTLQ6HA08 431 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 MRNIPQ6NTE8 343 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 AFTPHQ6ULP2 937 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 BMP8AQ7Z5Y6 402 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 CCDC91Q7Z6B0 441 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 C10orf107Q8IVU9 208 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 ARID3BQ8IVW6 561 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 TMEM151AQ8N4L1 468 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 PRSS33Q8NF86 280 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 OR4L1Q8NH43 312 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 ISG20Q96AZ6 181 aaKnown RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 TSPAN17Q96FV3 270 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 THOC1Q96FV9 657 aaKnown RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 SMIM14Q96QK8 99 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 BBS2Q9BXC9 721 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 LMAN2LQ9H0V9 348 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 SPHK2Q9NRA0 654 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 CATSPERZQ9NTU4 200 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 THAP1Q9NVV9 213 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 EVLQ9UI08 416 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 MRPS23Q9Y3D9 190 aaKnown RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 PIKFYVEQ9Y2I7 2098 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 C19orf67A6NJJ6 358 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 TARM1B6A8C7 271 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 ANKRD65E5RJM6 399 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 NEDD8-MDP1E9PL57 170 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 G3V2L1 256 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 H7C0S8 307 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 TRAFD1O14545 582 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 SLC9A3R1O14745 358 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 GFRA3O60609 400 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 KLHL2O95198 593 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 WISP3O95389 354 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 SERPINE1P05121 402 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 DLDP09622 509 aaKnown RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 PABPC1P11940 636 aaKnown RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 SRCP12931 536 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 TYRP14679 529 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 HOXB8P17481 243 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 SAT1P21673 171 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 KCNA4P22459 653 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 GRK2P25098 689 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 SLC8A1P32418 973 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 STC1P52823 247 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 SLC12A2P55011 1212 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 OVGP1Q12889 678 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 KCNC3Q14003 757 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 SEMA3AQ14563 771 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 DMC1Q14565 340 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 ZNF460Q14592 562 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 TSNAXIP1Q2TAA8 658 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 GALNTL6Q49A17 601 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 DGKKQ5KSL6 1271 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 ARMC12Q5T9G4 340 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 HECTD2Q5U5R9 776 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 LRRC8EQ6NSJ5 796 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 ZCCHC23Q6ZST2 131 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 KIAA0907Q7Z7F0 614 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 RBM23Q86U06 439 aaKnown RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 GBP7Q8N8V2 638 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 OR4K2Q8NGD2 314 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 OR2AP1Q8NGE2 309 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 RFWD2Q8NHY2 731 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 KCTD4Q8WVF5 259 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 PIH1D2Q8WWB5 315 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 ING5Q8WYH8 240 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 SMG7Q92540 1137 aaKnown RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 VOPP1Q96AW1 172 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 TSNARE1Q96NA8 513 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 GPR78Q96P69 363 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 NDNQ99608 321 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 OLFM1Q99784 485 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 C19orf43Q9BQ61 176 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 C20orf27Q9GZN8 174 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 ACTR5Q9H9F9 607 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 MAGEE1Q9HCI5 957 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 INTS10Q9NVR2 710 aaKnown RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 POLR3BQ9NW08 1133 aaPredicted RBP11.89□□□□□ -0.51
TRIM40-205ENST00000307859 FAM50BQ9Y247 325 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 ZNF711Q9Y462 761 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 PCDHB9Q9Y5E1 797 aa11.89□□□□□ -0.51
TRIM40-205ENST00000307859 COL4A3Q01955 1670 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms