RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 SERPINB5P36952 375 aa16.52■□□□□ 0.23
TVP23B-201ENST00000307767 CDKN1CP49918 316 aaPredicted RBP16.52■□□□□ 0.23
TVP23B-201ENST00000307767 KPNA2P52292 529 aaKnown RBP16.52■□□□□ 0.23
TVP23B-201ENST00000307767 MXRA7P84157 204 aa16.52■□□□□ 0.23
TVP23B-201ENST00000307767 TRAF2Q12933 501 aa16.52■□□□□ 0.23
TVP23B-201ENST00000307767 PDCD2Q16342 344 aaPredicted RBP16.52■□□□□ 0.23
TVP23B-201ENST00000307767 TRMT5Q32P41 509 aaKnown RBP16.52■□□□□ 0.23
TVP23B-201ENST00000307767 SH2D4BQ5SQS7 431 aa16.52■□□□□ 0.23
TVP23B-201ENST00000307767 C1orf53Q5VUE5 145 aa16.52■□□□□ 0.23
TVP23B-201ENST00000307767 FAM117BQ6P1L5 589 aa16.52■□□□□ 0.23
TVP23B-201ENST00000307767 TCEAL8Q8IYN2 117 aa16.52■□□□□ 0.23
TVP23B-201ENST00000307767 GABPB2Q8TAK5 448 aaPredicted RBP16.52■□□□□ 0.23
TVP23B-201ENST00000307767 DTX3LQ8TDB6 740 aa16.52■□□□□ 0.23
TVP23B-201ENST00000307767 ZNF558Q96NG5 402 aa16.52■□□□□ 0.23
TVP23B-201ENST00000307767 AARSD1Q9BTE6 412 aaKnown RBP16.52■□□□□ 0.23
TVP23B-201ENST00000307767 CATSPERZQ9NTU4 200 aa16.52■□□□□ 0.23
TVP23B-201ENST00000307767 DNMT3BQ9UBC3 853 aaKnown RBP16.52■□□□□ 0.23
TVP23B-201ENST00000307767 IKZF3Q9UKT9 509 aa16.52■□□□□ 0.23
TVP23B-201ENST00000307767 A0A0U1RQS6 177 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 LILRB3O75022 631 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 SLC4A1P02730 911 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 BMP1P13497 986 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 CDC25CP30307 473 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 ERFP50548 548 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 ASPHQ12797 758 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 LAMB3Q13751 1172 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 Q6ZNB5 142 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 OR4K2Q8NGD2 314 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 LPGAT1Q92604 370 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 PHF21BQ96EK2 531 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 G3BP2Q9UN86 482 aaKnown RBP16.51■□□□□ 0.23
TVP23B-201ENST00000307767 RAI2Q9Y5P3 530 aa16.51■□□□□ 0.23
TVP23B-201ENST00000307767 MKI67P46013 3256 aaKnown RBP16.51■□□□□ 0.23
TVP23B-201ENST00000307767 TMCC1O94876 653 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 ZNF37AP17032 561 aaPredicted RBP16.5■□□□□ 0.23
TVP23B-201ENST00000307767 IMPDH1P20839 514 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 C1QTNF8P60827 252 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 SMAD3P84022 425 aaKnown RBP16.5■□□□□ 0.23
TVP23B-201ENST00000307767 SLC34A1Q06495 639 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 TAF1AQ15573 450 aaPredicted RBP16.5■□□□□ 0.23
TVP23B-201ENST00000307767 OR4D1Q15615 310 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 UNC50Q53HI1 259 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 MRNIPQ6NTE8 343 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 NCEH1Q6PIU2 408 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 PIANPQ8IYJ0 282 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 PELI3Q8N2H9 469 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 BBS5Q8N3I7 341 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 EFCAB3Q8N7B9 438 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 HMGCLL1Q8TB92 370 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 SCG3Q8WXD2 468 aaKnown RBP16.5■□□□□ 0.23
TVP23B-201ENST00000307767 L3HYPDHQ96EM0 354 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 TMEM169Q96HH4 297 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 RTKNQ9BST9 563 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 SCUBE2Q9NQ36 999 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 ARIH1Q9Y4X5 557 aaPredicted RBP16.5■□□□□ 0.23
TVP23B-201ENST00000307767 INSL5Q9Y5Q6 135 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 PRAMEF12O95522 483 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 C1RP00736 705 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 CUL3Q13618 768 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 ZNF678Q5SXM1 525 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 RNF111Q6ZNA4 994 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 DDX53Q86TM3 631 aaKnown RBP16.5■□□□□ 0.23
TVP23B-201ENST00000307767 DEFB107AQ8IZN7 70 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 TTC30BQ8N4P2 665 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 EID2BQ96D98 161 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 MARK4Q96L34 752 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 CATSPER2Q96P56 530 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 FEM1AQ9BSK4 669 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 GALPQ9UBC7 116 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 CDH22Q9UJ99 828 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 CORO1CQ9ULV4 474 aaPredicted RBP16.5■□□□□ 0.23
TVP23B-201ENST00000307767 CDYLQ9Y232 598 aa16.5■□□□□ 0.23
TVP23B-201ENST00000307767 COPG1Q9Y678 874 aaKnown RBP16.5■□□□□ 0.23
TVP23B-201ENST00000307767 CCDC189A1A4V9 331 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 FZD6O60353 706 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 PDE5AO76074 875 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 CRTAMO95727 393 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 MBL2P11226 248 aaPredicted RBP16.49■□□□□ 0.23
TVP23B-201ENST00000307767 NFKB2Q00653 900 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 GALNT1Q10472 559 aaPredicted RBP16.49■□□□□ 0.23
TVP23B-201ENST00000307767 TXNDC8Q6A555 127 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 KLC3Q6P597 504 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 CHSY3Q70JA7 882 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 CUZD1Q86UP6 607 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 SNX32Q86XE0 403 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 FAM217AQ8IXS0 508 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 ARL14EPQ8N8R7 260 aaPredicted RBP16.49■□□□□ 0.23
TVP23B-201ENST00000307767 LPCAT1Q8NF37 534 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 FAM136AQ96C01 138 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 RMDN1Q96DB5 314 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 CCDC126Q96EE4 140 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 BIRC8Q96P09 236 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 ATOH8Q96SQ7 321 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 POPDC3Q9HBV1 291 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 NMRK1Q9NWW6 199 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 LTBP2Q14767 1821 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 RGSL1A5PLK6 1076 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 ANKRD66B4E2M5 251 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 TEX28O15482 410 aa16.49■□□□□ 0.23
TVP23B-201ENST00000307767 TBL1XO60907 577 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms