RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 DSN1Q9H410 356 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 EPB41L4AQ9HCS5 686 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 PRDM5Q9NQX1 630 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 COMMD9Q9P000 198 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 RPS6KB2Q9UBS0 482 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 DMGDHQ9UI17 866 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 DAPK2Q9UIK4 370 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 A0A087X0T9 212 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 PRRG1O14668 218 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ASS1P00966 412 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 HLA-DRAP01903 254 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 FAM228BP0C875 321 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 UROSP10746 265 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 FKBP2P26885 142 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 ATP5C1P36542 298 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 RBM34P42696 430 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 PLET1Q6UQ28 207 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 LONP2Q86WA8 852 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 RFT1Q96AA3 541 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 PELOQ9BRX2 385 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 VPS4AQ9UN37 437 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 RAB19A4D1S5 217 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 FPGTO14772 594 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 SLC7A4O43246 635 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 APOC1P02654 83 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 FGBP02675 491 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 AGTR1P30556 359 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 RARRES1P49788 294 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 LCP2Q13094 533 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 MAMLD1Q13495 774 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 C1orf186Q6ZWK4 172 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ARHGAP12Q8IWW6 846 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ZCCHC7Q8N3Z6 543 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 PCDHGA10Q9Y5H3 936 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 OR2AG2A6NM03 316 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 FGFR4P22455 802 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ATP4BP51164 291 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ACTA2P62736 377 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ACTG2P63267 376 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 MTMR2Q13614 643 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 LARS2Q15031 903 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 RASAL3Q86YV0 1011 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 PIH1D3Q9NQM4 214 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 TSR3Q9UJK0 312 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 PHGDHO43175 533 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 PIM1P11309 404 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 GTF2E2P29084 291 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 CYCSP99999 105 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 SMCO1Q147U7 214 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 TPGS2Q68CL5 300 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 SPPL2BQ8TCT7 592 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 DPY30Q9C005 99 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 CRLS1Q9UJA2 301 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 NUDT5Q9UKK9 219 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 PRKYO43930 277 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 AK1P00568 194 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 CD2P06729 351 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ALDH4A1P30038 563 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 SLC7A1P30825 629 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 OR1E1P30953 314 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 DYNLT1P63172 113 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 MRPS10P82664 201 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 RING1Q06587 406 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 NIPAL4Q0D2K0 466 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 FADDQ13158 208 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 HJURPQ8NCD3 748 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 ALG13Q9NP73 1137 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 HEY2Q9UBP5 337 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 STXBP5LQ9Y2K9 1186 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 MTCL1Q9Y4B5 1905 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 AHDC1Q5TGY3 1603 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 ANKDD1BA6NHY2 528 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 PGRMC2O15173 223 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 CLOCKO15516 846 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 PEX10O60683 326 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 GJB6O95452 261 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 CLUP10909 449 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 NOS3P29474 1203 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 GABARAPL2P60520 117 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 SP4Q02446 784 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 TSHZ1Q6ZSZ6 1077 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 CCNYL1Q8N7R7 359 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 CCDC107Q8WV48 283 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 TRUB1Q8WWH5 349 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 NSMCE3Q96MG7 304 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 GAD1Q99259 594 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 MAGIXQ9H6Y5 334 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 NDFIP2Q9NV92 336 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 NUDT4Q9NZJ9 180 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ATG13O75143 517 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 NTSP30990 170 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 TAF5Q15542 800 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 MEDAGQ5VYS4 303 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 DNM1P34Q6PK57 102 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 TIFABQ6ZNK6 161 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 POLR2J2Q9GZM3 115 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 POLR2J3Q9H1A7 115 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 UNC93B1Q9H1C4 597 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 MAGEH1Q9H213 219 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ADAMTS10Q9H324 1103 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms