RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 TRIM43Q96BQ3 446 aaPredicted RBP12.65□□□□□ -0.38
USP38-201ENST00000307017 GPR75-ASB3A0A0A6YYF3 556 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 IGSF6O95976 241 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 BACE1P56817 501 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 SLC1A5Q15758 541 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 CRY2Q49AN0 593 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ZFP1Q6P2D0 407 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 AGMOQ6ZNB7 445 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 MCFD2Q8NI22 146 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 KLK6Q92876 244 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 CDK15Q96Q40 435 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ADAM2Q99965 735 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 GLIS2Q9BZE0 524 aaPredicted RBP12.65□□□□□ -0.38
USP38-201ENST00000307017 FAM192AQ9GZU8 254 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 C15orf38-AP3S2A0A0A6YYH1 394 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 A0A0G2JN53 185 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ZW10O43264 779 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 SCGB1D2O95969 90 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 COL6A1P12109 1028 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 CTSKP43235 329 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 RARRES1P49788 294 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ZNF280DQ6N043 979 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ARPINQ7Z6K5 226 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ADGRG2Q8IZP9 1017 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ARMC10Q8N2F6 343 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 SEMA3CQ99985 751 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 WRAP53Q9BUR4 548 aaKnown RBP12.65□□□□□ -0.38
USP38-201ENST00000307017 UGT1A9O60656 530 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 PRKCGP05129 697 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 ITGA2BP08514 1039 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
USP38-201ENST00000307017 CYP27C1Q4G0S4 372 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 MAP1SQ66K74 1059 aaPredicted RBP12.64□□□□□ -0.39
USP38-201ENST00000307017 CAMK1DQ8IU85 385 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 SLC25A23Q9BV35 468 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 UGT1A7Q9HAW7 530 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 UGT1A10Q9HAW8 530 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 UGT1A8Q9HAW9 530 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 GNPTGQ9UJJ9 305 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 SNX6Q9UNH7 406 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 ZNF232Q9UNY5 417 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 AURKAO14965 403 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 MID1O15344 667 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 PGK1P00558 417 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 PRLRP16471 622 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 RENBPP51606 427 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 CD83Q01151 205 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 TGM3Q08188 693 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 SLC45A4Q5BKX6 768 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 SLC30A6Q6NXT4 461 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 HHIPL2Q6UWX4 724 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 MOB2Q70IA6 237 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 CXorf40AQ8TE69 158 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 BARD1Q99728 777 aaKnown RBP12.64□□□□□ -0.39
USP38-201ENST00000307017 IMP3Q9NV31 184 aaKnown RBP12.64□□□□□ -0.39
USP38-201ENST00000307017 MBD2Q9UBB5 411 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 TESMINQ9Y4I5 508 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 UNC13BO14795 1591 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 PRAMEF33A0A0G2JMD5 474 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 PRAMEF10O60809 474 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 TFPIP10646 304 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 PSKH1P11801 424 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 ACLYP53396 1101 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 AQP4P55087 323 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 RAB10P61026 200 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 CDKL1Q00532 357 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 UGCGQ16739 394 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 C5orf22Q49AR2 442 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 TCF25Q9BQ70 676 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 BEX2Q9BXY8 128 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 CDH19Q9H159 772 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 BEX1Q9HBH7 125 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 SGK2Q9HBY8 427 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 EIF3KQ9UBQ5 218 aaKnown RBP12.64□□□□□ -0.39
USP38-201ENST00000307017 HBS1LQ9Y450 684 aaKnown RBP12.64□□□□□ -0.39
USP38-201ENST00000307017 H3BM21 787 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 MANFP55145 182 aaKnown RBP12.64□□□□□ -0.39
USP38-201ENST00000307017 C1QBPQ07021 282 aaKnown RBP12.64□□□□□ -0.39
USP38-201ENST00000307017 HSPB3Q12988 150 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 RIPK1Q13546 671 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 BTG3Q14201 252 aaPredicted RBP12.64□□□□□ -0.39
USP38-201ENST00000307017 TCEAL5Q5H9L2 206 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 TMEM203Q969S6 136 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 DHRS1Q96LJ7 313 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 HTATIP2Q9BUP3 242 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 INTS10Q9NVR2 710 aaKnown RBP12.64□□□□□ -0.39
USP38-201ENST00000307017 RAB23Q9ULC3 237 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 YDJCA8MPS7 323 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 MUTP22033 750 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 PEX2P28328 305 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 CCNFP41002 786 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 EIF2S3P41091 472 aaKnown RBP12.64□□□□□ -0.39
USP38-201ENST00000307017 CCNYL2Q5T2Q4 361 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 REP15Q6BDI9 236 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 DEFB132Q7Z7B7 95 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 NT5DC4Q86YG4 428 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 MAB21L3Q8N8X9 362 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 JOSD2Q8TAC2 188 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 NXNL1Q96CM4 212 aa12.64□□□□□ -0.39
USP38-201ENST00000307017 EBF3Q9H4W6 596 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms