RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 RPA3P35244 121 aaPredicted RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 CCNFP41002 786 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 LEPRP48357 1165 aaKnown RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 SERPINB8P50452 374 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 MPP1Q00013 466 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 SMAD4Q13485 552 aaKnown RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 ZNF234Q14588 700 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 TERF2Q15554 542 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 HNRNPA1L2Q32P51 320 aaKnown RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 ARSIQ5FYB1 569 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 LYSMD3Q7Z3D4 306 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 ZSWIM9Q86XI8 627 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 SUGP1Q8IWZ8 645 aaKnown RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 MGARPQ8TDB4 240 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 HCAR2Q8TDS4 363 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 DYDC1Q8WWB3 177 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 SCG3Q8WXD2 468 aaKnown RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 LRCH3Q96II8 777 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 GPR22Q99680 433 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 POLR3BQ9NW08 1133 aaPredicted RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 IL17CQ9P0M4 197 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 MTO1Q9Y2Z2 717 aaKnown RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 H7C0S8 307 aa17.54■□□□□ 0.4
KRT28-201ENST00000306658 GABRB3P28472 473 aa17.54■□□□□ 0.4
KRT28-201ENST00000306658 PTPRRQ15256 657 aa17.54■□□□□ 0.4
KRT28-201ENST00000306658 FASTKD1Q53R41 847 aaKnown RBP17.54■□□□□ 0.4
KRT28-201ENST00000306658 NAIF1Q69YI7 327 aaPredicted RBP17.54■□□□□ 0.4
KRT28-201ENST00000306658 SERPINA13PQ6UXR4 307 aa17.54■□□□□ 0.4
KRT28-201ENST00000306658 TPRG1Q6ZUI0 275 aa17.54■□□□□ 0.4
KRT28-201ENST00000306658 DENND1AQ8TEH3 1009 aa17.54■□□□□ 0.4
KRT28-201ENST00000306658 ISL2Q96A47 359 aa17.54■□□□□ 0.4
KRT28-201ENST00000306658 CABS1Q96KC9 395 aa17.54■□□□□ 0.4
KRT28-201ENST00000306658 UBE2ZQ9H832 354 aaPredicted RBP17.54■□□□□ 0.4
KRT28-201ENST00000306658 MKS1Q9NXB0 559 aa17.54■□□□□ 0.4
KRT28-201ENST00000306658 COL4A3Q01955 1670 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 OR51F1A6NGY5 319 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 HAUS5O94927 633 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 PRNPP04156 253 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 OGNP20774 298 aaKnown RBP17.53■□□□□ 0.4
KRT28-201ENST00000306658 PMLP29590 882 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 LSP1P33241 339 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 SKIV2LQ15477 1246 aaKnown RBP17.53■□□□□ 0.4
KRT28-201ENST00000306658 CCDC85BQ15834 202 aaPredicted RBP17.53■□□□□ 0.4
KRT28-201ENST00000306658 ZNF805Q5CZA5 627 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 PLCD3Q8N3E9 789 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 ZNF366Q8N895 744 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 TCP10LQ8TDR4 215 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 ATXN2LQ8WWM7 1075 aaKnown RBP17.53■□□□□ 0.4
KRT28-201ENST00000306658 CHFRQ96EP1 664 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 MCCC1Q96RQ3 725 aaPredicted RBP17.53■□□□□ 0.4
KRT28-201ENST00000306658 SLC13A1Q9BZW2 595 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 TMEM245Q9H330 911 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 MTG2Q9H4K7 406 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 BPIFA1Q9NP55 256 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 FBXO6Q9NRD1 293 aaPredicted RBP17.53■□□□□ 0.4
KRT28-201ENST00000306658 SNX15Q9NRS6 342 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 PCMTD2Q9NV79 361 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 THAP10Q9P2Z0 257 aaPredicted RBP17.53■□□□□ 0.4
KRT28-201ENST00000306658 SUN2Q9UH99 717 aa17.53■□□□□ 0.4
KRT28-201ENST00000306658 PFDN6O15212 129 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 MBTPS2O43462 519 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 MPOP05164 745 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 F7P08709 466 aaPredicted RBP17.52■□□□□ 0.4
KRT28-201ENST00000306658 CRHR1P34998 444 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 ABCG1P45844 678 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 IL9RQ01113 521 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 LRRC14Q15048 493 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 CDKN3Q16667 212 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 AAK1Q2M2I8 961 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 TAX1BP1Q86VP1 789 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 OR8D1Q8WZ84 308 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 TCF12Q99081 682 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 MARCH4Q9P2E8 410 aaPredicted RBP17.52■□□□□ 0.4
KRT28-201ENST00000306658 DKK3Q9UBP4 350 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 DCDC2Q9UHG0 476 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 FKBPLQ9UIM3 349 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 SLC39A10Q9ULF5 831 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 STARD13Q9Y3M8 1113 aa17.52■□□□□ 0.4
KRT28-201ENST00000306658 TSPAN11A1L157 253 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 NPIPB15A6NHN6 443 aaPredicted RBP17.52■□□□□ 0.39
KRT28-201ENST00000306658 C2CD4DB7Z1M9 353 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 NPC1O15118 1278 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 CLDN7O95471 211 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 S1PR4O95977 384 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 CTSLP07711 333 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 MC4RP32245 332 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 MAGEA12P43365 314 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 GALK1P51570 392 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 CLCN5P51795 746 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 NEK3P51956 506 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 ELAVL3Q14576 367 aaKnown RBP17.52■□□□□ 0.39
KRT28-201ENST00000306658 USP10Q14694 798 aaKnown RBP17.52■□□□□ 0.39
KRT28-201ENST00000306658 C9orf64Q5T6V5 341 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 HHATQ5VTY9 493 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 CRTC1Q6UUV9 634 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 SFTPA1Q8IWL2 248 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 TMIEQ8NEW7 156 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 EID2BQ96D98 161 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 P2RY13Q9BPV8 354 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 PAIP2Q9BPZ3 127 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms