RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 C15orf39Q6ZRI6 1047 aa9.27□□□□□ -0.93
PTPRE-202ENST00000306042 ZNF614Q8N883 585 aa9.27□□□□□ -0.93
PTPRE-202ENST00000306042 HDAC7Q8WUI4 952 aa9.27□□□□□ -0.93
PTPRE-202ENST00000306042 MYLIPQ8WY64 445 aa9.27□□□□□ -0.93
PTPRE-202ENST00000306042 QRFPRQ96P65 431 aa9.27□□□□□ -0.93
PTPRE-202ENST00000306042 CARS2Q9HA77 564 aaKnown RBP9.27□□□□□ -0.93
PTPRE-202ENST00000306042 VCX3AQ9NNX9 186 aa9.27□□□□□ -0.93
PTPRE-202ENST00000306042 GPN3Q9UHW5 284 aaPredicted RBP9.27□□□□□ -0.93
PTPRE-202ENST00000306042 R3HDM2Q9Y2K5 976 aaKnown RBP9.27□□□□□ -0.93
PTPRE-202ENST00000306042 KCNE2Q9Y6J6 123 aa9.27□□□□□ -0.93
PTPRE-202ENST00000306042 SDK1Q7Z5N4 2213 aa9.27□□□□□ -0.93
PTPRE-202ENST00000306042 H3BNC9 293 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 CNTN5O94779 1100 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 LATS1O95835 1130 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 TPSB2P20231 275 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 TLX1P31314 330 aaPredicted RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 PRIM2P49643 509 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 GYS2P54840 703 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 KRT72Q14CN4 511 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 TPSAB1Q15661 275 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 SPATA21Q7Z572 469 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 TMPRSS6Q8IU80 811 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 CFAP206Q8IYR0 622 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 TSEN2Q8NCE0 465 aaKnown RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 TBATAQ96M53 351 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 ARHGAP9Q9BRR9 750 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 ACAT2Q9BWD1 397 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 KLQ9UEF7 1012 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 UPK3BL1B0FP48 263 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 UPK3BL2E5RIL1 263 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 DDX3YO15523 660 aaKnown RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 AVILO75366 819 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 SH3BGRLO75368 114 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 CCNDBP1O95273 360 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 MLNP12872 115 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 NTSR1P30989 418 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 GABRB2P47870 512 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 HADHBP55084 474 aaKnown RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 FAM189BP81408 668 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 PLOD1Q02809 727 aaPredicted RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 FAM171BQ6P995 826 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 CYP20A1Q6UW02 462 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 CYP4X1Q8N118 509 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 TXNDC5Q8NBS9 432 aaKnown RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 PIGKQ92643 395 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 C1orf74Q96LT6 269 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 HGH1Q9BTY7 390 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 MID1IP1Q9NPA3 183 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 TMEM248Q9NWD8 314 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 GGT7Q9UJ14 662 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 CPED1A4D0V7 1026 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 GABRDO14764 452 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 KDELR3O43731 214 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 PRKCGP05129 697 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 KRT16P08779 473 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 PKMP14618 531 aaKnown RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 NCALDP61601 193 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 USP46P62068 366 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 RGS1Q08116 209 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 DSC1Q08554 894 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 SF1Q15637 639 aaKnown RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 PFKFB4Q16877 469 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 LDLRAP1Q5SW96 308 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 MSANTD2Q6P1R3 559 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 TMEM220Q6QAJ8 160 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 LMAN1LQ9HAT1 526 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 FAM32AQ9Y421 112 aaKnown RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 A0A1W2PPC1 479 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 J3KR12 359 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 TRIM13O60858 407 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 PIGNO95427 931 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 CDH3P22223 829 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 CDH5P33151 784 aaPredicted RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 GNPDA1P46926 289 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 PPIDQ08752 370 aaKnown RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 LMAN2Q12907 356 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 ANKRD20A4Q4UJ75 823 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 SEL1L3Q68CR1 1132 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 SMYD5Q6GMV2 418 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 ZNF598Q86UK7 904 aaKnown RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 TAGAPQ8N103 731 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 ATOH1Q92858 354 aaPredicted RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 LINGO1Q96FE5 620 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 ZNF514Q96K75 400 aaPredicted RBP9.26□□□□□ -0.93
PTPRE-202ENST00000306042 Q9H521 79 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 RMND5AQ9H871 391 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 PADI4Q9UM07 663 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 VWA7Q9Y334 891 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 MYH11P35749 1972 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 COL4A5P29400 1685 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 ANKRD31Q8N7Z5 1873 aa9.26□□□□□ -0.93
PTPRE-202ENST00000306042 SLCO1B7G3V0H7 640 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 NPC1O15118 1278 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 ATP5HO75947 161 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 IL1R2P27930 398 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 CHI3L1P36222 383 aaPredicted RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 CCR3P51677 355 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 ZNF132P52740 706 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 WNT7BP56706 349 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms