RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 U3KQV3 271 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 NPHS1O60500 1241 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 NR4A1P22736 598 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 S100A3P33764 101 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 PGGT1BP53609 377 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 SLC10A2Q12908 348 aaPredicted RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 SPDYE7PQ495Y7 208 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 INTS6LQ5JSJ4 861 aaKnown RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 FAM171A1Q5VUB5 890 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 ZNF280DQ6N043 979 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 DLK2Q6UY11 383 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 HFE2Q6ZVN8 426 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 HEATR4Q86WZ0 1026 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.3□□□□□ -0.28
DDX54-201ENST00000306014 SETD9Q8NE22 299 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 SPPL2AQ8TCT8 520 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 CANT1Q8WVQ1 401 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 HBEGFQ99075 208 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 OXCT2Q9BYC2 517 aaPredicted RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 HPS4Q9NQG7 708 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 OPTCQ9UBM4 332 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 ST3GAL5Q9UNP4 418 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 BTAF1O14981 1849 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 RGS14O43566 566 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 SH3BGRLO75368 114 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 AHSGP02765 367 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 MZF1P28698 734 aaPredicted RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 DSC2Q02487 901 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 MAD2L1Q13257 205 aaPredicted RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 TARBP2Q15633 366 aaKnown RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 DGUOKQ16854 277 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 ZC3HC1Q86WB0 502 aaKnown RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 LRRC49Q8IUZ0 686 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 GPR152Q8TDT2 470 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 FOPNLQ96NB1 174 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 KCNK13Q9HB14 408 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 C3orf18Q9UK00 162 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 TRPV2Q9Y5S1 764 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 A0A1B0GUL6 1792 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 SF3B1O75533 1304 aaKnown RBP eCLIP13.29□□□□□ -0.283e-6■■■■■ 139.6
DDX54-201ENST00000306014 PDLIM1O00151 329 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 SCAMP3O14828 347 aaKnown RBP13.29□□□□□ -0.28
DDX54-201ENST00000306014 DHRS4L1P0CG22 281 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 HLA-DPA1P20036 260 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 CCNCP24863 283 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 ST13P50502 369 aaKnown RBP13.29□□□□□ -0.28
DDX54-201ENST00000306014 NRG1Q02297 640 aaPredicted RBP13.29□□□□□ -0.28
DDX54-201ENST00000306014 LIPEQ05469 1076 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 CCNIQ14094 377 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 PCBP1Q15365 356 aaKnown RBP eCLIP13.29□□□□□ -0.28
DDX54-201ENST00000306014 DDR2Q16832 855 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 CXCL17Q6UXB2 119 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 ZNF554Q86TJ5 538 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 SEPT8Q92599 483 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 BORCS5Q969J3 196 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 ASB9Q96DX5 294 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 TLE6Q9H808 572 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 LIN28AQ9H9Z2 209 aaKnown RBP13.29□□□□□ -0.28
DDX54-201ENST00000306014 VPS45Q9NRW7 570 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 SMPD3Q9NY59 655 aaPredicted RBP13.29□□□□□ -0.28
DDX54-201ENST00000306014 MOXD2PA6NHM9 499 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 MATN2O00339 956 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 CBFA2T3O75081 653 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 CYBBP04839 570 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 MAPK1P28482 360 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 INCA1Q0VD86 236 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 KRT33BQ14525 404 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 BRMS1LQ5PSV4 323 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 LDLRAP1Q5SW96 308 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 GLYATQ6IB77 296 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 OR9I1Q8NGQ6 314 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 SLC9A7Q96T83 725 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 APOL4Q9BPW4 351 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 MLPHQ9BV36 600 aaPredicted RBP13.29□□□□□ -0.28
DDX54-201ENST00000306014 FAM105AQ9NUU6 356 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 CACNG4Q9UBN1 327 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 ARHGEF9O43307 516 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 RPS9P46781 194 aaKnown RBP13.29□□□□□ -0.28
DDX54-201ENST00000306014 SLC5A3P53794 718 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 ACAP2Q15057 778 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 DEPDC1Q5TB30 811 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 ZNF621Q6ZSS3 439 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 KIAA0408Q6ZU52 694 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 RPS27LQ71UM5 84 aaKnown RBP13.29□□□□□ -0.28
DDX54-201ENST00000306014 FAM9CQ8IZT9 166 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 ARFGAP1Q8N6T3 406 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 CENPNQ96H22 339 aaPredicted RBP13.29□□□□□ -0.28
DDX54-201ENST00000306014 GLT1D1Q96MS3 346 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 NOL6Q9H6R4 1146 aaKnown RBP13.29□□□□□ -0.28
DDX54-201ENST00000306014 PREBQ9HCU5 417 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 USE1Q9NZ43 259 aa13.29□□□□□ -0.28
DDX54-201ENST00000306014 COL1A2P08123 1366 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 PIP5K1BO14986 540 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 MMP3P08254 477 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 CRYBB1P53674 252 aaPredicted RBP13.28□□□□□ -0.28
DDX54-201ENST00000306014 EPS8Q12929 822 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 DUSP28Q4G0W2 176 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 ALG2Q9H553 416 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 MOCS1Q9NZB8 636 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms