RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 REXO4Q9GZR2 422 aaKnown RBP13.05□□□□□ -0.32
TRIM35-201ENST00000305364 DEFB129Q9H1M3 183 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 POLE4Q9NR33 117 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 RGS18Q9NS28 235 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 MTRRQ9UBK8 725 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 SHANK3Q9BYB0 1731 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 ECT2LQ008S8 904 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 PIGFQ07326 219 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 SLC10A6Q3KNW5 377 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 FBXO47Q5MNV8 452 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 GLYATQ6IB77 296 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 LRRC8DQ7L1W4 858 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 FAM126BQ8IXS8 530 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 AGBL3Q8NEM8 1001 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 ITPKCQ96DU7 683 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 TBCDQ9BTW9 1192 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 NACA2Q9H009 215 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 OR12D3Q9UGF7 316 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 RNF112Q9ULX5 631 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 PDE10AQ9Y233 779 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 ST13P50502 369 aaKnown RBP13.05□□□□□ -0.32
TRIM35-201ENST00000305364 RABL3Q5HYI8 236 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 NHSL2Q5HYW2 709 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 ZNF773Q6PK81 442 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 LDB1Q86U70 411 aaPredicted RBP13.05□□□□□ -0.32
TRIM35-201ENST00000305364 GBA3Q9H227 469 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 C8orf4Q9NR00 106 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 RCOR3Q9P2K3 495 aaPredicted RBP13.05□□□□□ -0.32
TRIM35-201ENST00000305364 ZNHIT2Q9UHR6 403 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 FZD10Q9ULW2 581 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 U3KQV3 271 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 A8MT66 165 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 PGK2P07205 417 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 INSRRP14616 1297 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 ZNF24P17028 368 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 TMBIM6P55061 237 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 VAC14Q08AM6 782 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 PPP1R8Q12972 351 aaKnown RBP13.05□□□□□ -0.32
TRIM35-201ENST00000305364 TMEM135Q86UB9 458 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 SNX29P2Q8IUI4 249 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 MINDY3Q9H8M7 445 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 MYOZ2Q9NPC6 264 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 GIMAP4Q9NUV9 329 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 RIC8BQ9NVN3 520 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 ERAP1Q9NZ08 941 aa13.05□□□□□ -0.32
TRIM35-201ENST00000305364 CST1P01037 141 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 ARF4P18085 180 aaPredicted RBP13.04□□□□□ -0.32
TRIM35-201ENST00000305364 SLC1A2P43004 574 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 GMPSP49915 693 aaPredicted RBP13.04□□□□□ -0.32
TRIM35-201ENST00000305364 GPR158Q5T848 1215 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 PIWIL3Q7Z3Z3 882 aaKnown RBP13.04□□□□□ -0.32
TRIM35-201ENST00000305364 TICAM1Q8IUC6 712 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 LEMD2Q8NC56 503 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 PPM1MQ96MI6 270 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 NODALQ96S42 347 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 RANBP9Q96S59 729 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 ZNF347Q96SE7 839 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 SLC2A11Q9BYW1 496 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 AKTIPQ9H8T0 292 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 ACTR3BQ9P1U1 418 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 TCRBV3S1A0A5B6 114 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 CLDN5O00501 218 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 HCRTO43612 131 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 PEX10O60683 326 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 ADRA1BP35368 520 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 OPRL1P41146 370 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 GJA9P57773 515 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 C1QTNF8P60827 252 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 NBPF12Q5TAG4 269 aaPredicted RBP13.04□□□□□ -0.32
TRIM35-201ENST00000305364 TTC30BQ8N4P2 665 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 DNERQ8NFT8 737 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 TWIST2Q8WVJ9 160 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 LRRC58Q96CX6 371 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 HSFY1Q96LI6 401 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 ADAMTS10Q9H324 1103 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 EHD1Q9H4M9 534 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 TIMM22Q9Y584 194 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 COL14A1Q05707 1796 aaKnown RBP13.04□□□□□ -0.32
TRIM35-201ENST00000305364 ZCWPW2A0A1B0GU75 182 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 TYW5A2RUC4 315 aaKnown RBP13.04□□□□□ -0.32
TRIM35-201ENST00000305364 G3V2T6 193 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 PIP5K1BO14986 540 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 NOBOXO60393 691 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 DNAJB2P25686 324 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 MTHFRP42898 656 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 GSK3BP49841 420 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 HLCSP50747 726 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 INTS11Q5TA45 600 aaKnown RBP13.04□□□□□ -0.32
TRIM35-201ENST00000305364 ARHGAP36Q6ZRI8 547 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 R3HCC1LQ7Z5L2 792 aaKnown RBP13.04□□□□□ -0.32
TRIM35-201ENST00000305364 SLC22A16Q86VW1 577 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 CHST13Q8NET6 341 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 SLC35F5Q8WV83 523 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 ACDQ96AP0 544 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 ULBP1Q9BZM6 244 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 TKTL2Q9H0I9 626 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 RIBC2Q9H4K1 309 aa13.04□□□□□ -0.32
TRIM35-201ENST00000305364 LEF1Q9UJU2 399 aaPredicted RBP13.04□□□□□ -0.32
TRIM35-201ENST00000305364 SLC30A1Q9Y6M5 507 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms