RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 FAM98BQ52LJ0 330 aaKnown RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ZMIZ2Q8NF64 920 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 DNAJC9Q8WXX5 260 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 SGIP1Q9BQI5 828 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 GORASP1Q9BQQ3 440 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 RBPJLQ9UBG7 517 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF490Q9ULM2 529 aaPredicted RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 PLAGL2Q9UPG8 496 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 LTA4HP09960 611 aaKnown RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 PSMC3P17980 439 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ULK2Q8IYT8 1036 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 C3orf20Q8ND61 904 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 SLC35C1Q96A29 364 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 TSSK3Q96PN8 268 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 TPSD1Q9BZJ3 242 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 PCDH10Q9P2E7 1040 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 DMTF1Q9Y222 760 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 PCDHB11Q9Y5F2 797 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 URADA6NGE7 173 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 SIGLEC16A6NMB1 481 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 TEX28O15482 410 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 ANXA6P08133 673 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 NUP62P37198 522 aaPredicted RBP7.81□□□□□ -1.16
SCN9A-201ENST00000303354 SLC9A7Q96T83 725 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 PDZD7Q9H5P4 517 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 LDAHQ9H6V9 325 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 SLC40A1Q9NP59 571 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 HCN2Q9UL51 889 aa7.81□□□□□ -1.16
SCN9A-201ENST00000303354 EME2A4GXA9 379 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 SGTAO43765 313 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 GMFBP60983 142 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 SH3PXD2AQ5TCZ1 1133 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 ABHD15Q6UXT9 468 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 BPIFB6Q8NFQ5 453 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 UBASH3BQ8TF42 649 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 XAGE5Q8WWM1 108 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 VPS35Q96QK1 796 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 TRMT61BQ9BVS5 477 aaKnown RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 BHLHE41Q9C0J9 482 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 CARS2Q9HA77 564 aaKnown RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 RRN3Q9NYV6 651 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 CYP8B1Q9UNU6 501 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 PDE2AO00408 941 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 FPGTO14772 594 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 UGT1A9O60656 530 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 SPATA31C1P0DKV0 1188 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 UGT1A6P19224 532 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 UGT1A1P22309 533 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 UGT1A4P22310 534 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 LRPAP1P30533 357 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 RPL9P32969 192 aaKnown RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 UGT1A3P35503 534 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 UGT1A5P35504 534 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 MSANTD2Q6P1R3 559 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 NIPA1Q7RTP0 329 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 TMEM130Q8N3G9 435 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 MAGEE2Q8TD90 523 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF483Q8TF39 744 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 PSMG2Q969U7 264 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 DHRS1Q96LJ7 313 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 CARD9Q9H257 536 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 ALG2Q9H553 416 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 UGT1A7Q9HAW7 530 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 UGT1A10Q9HAW8 530 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 UGT1A8Q9HAW9 530 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 PSME2Q9UL46 239 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 LOC100506127A0A0U1RQW1 187 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 CBX6O95503 412 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 ALPPL2P10696 532 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 SOX6P35712 828 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 HSPA7P48741 367 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 CDK18Q07002 472 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 TOP3AQ13472 1001 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 COL9A3Q14050 684 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF248Q8NDW4 579 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 THAP3Q8WTV1 239 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 NKD1Q969G9 470 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 OR10H3O60404 316 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 NR2C2P49116 596 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 GALK1P51570 392 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 INAQ16352 499 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF648Q5T619 568 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 RIBC1Q8N443 379 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 BHLHE22Q8NFJ8 381 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 DCUN1D5Q9BTE7 237 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 FAIM2Q9BWQ8 316 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 PHPT1Q9NRX4 125 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 BLOC1S6Q9UL45 172 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 FAM25EA8MYX2 175 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 ARVCFO00192 962 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 PLGP00747 810 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 HDDC2Q7Z4H3 204 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 C10orf107Q8IVU9 208 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 AGGF1Q8N302 714 aaeCLIP7.8□□□□□ -1.161e-10■□□□□ 9.6
SCN9A-201ENST00000303354 ZNF276Q8N554 614 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 MOSPD2Q8NHP6 518 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 LCN9Q8WX39 176 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 SRMSQ9H3Y6 488 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 KCNMB3Q9NPA1 279 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 TAGLN3Q9UI15 199 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms