RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 POP5Q969H6 163 aaKnown RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 OR52E6Q96RD3 313 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 TMEM27Q9HBJ8 222 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 INTS10Q9NVR2 710 aaKnown RBP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 CPA4Q9UI42 421 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 PACSIN3Q9UKS6 424 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.4□□□□□ -0.74
CLIP1-201ENST00000302528 ASF1AQ9Y294 204 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 PCDHGC5Q9Y5F6 944 aa10.4□□□□□ -0.74
CLIP1-201ENST00000302528 NCK1P16333 377 aa10.4□□□□□ -0.75
CLIP1-201ENST00000302528 HERVK_113P62684 666 aa10.4□□□□□ -0.75
CLIP1-201ENST00000302528 PRKG2Q13237 762 aa10.4□□□□□ -0.75
CLIP1-201ENST00000302528 USF2Q15853 346 aaPredicted RBP10.4□□□□□ -0.75
CLIP1-201ENST00000302528 PSMD5Q16401 504 aa10.4□□□□□ -0.75
CLIP1-201ENST00000302528 OCLNQ16625 522 aa10.4□□□□□ -0.75
CLIP1-201ENST00000302528 EML3Q32P44 896 aa10.4□□□□□ -0.75
CLIP1-201ENST00000302528 C9orf64Q5T6V5 341 aa10.4□□□□□ -0.75
CLIP1-201ENST00000302528 TP53INP1Q96A56 240 aa10.4□□□□□ -0.75
CLIP1-201ENST00000302528 EQTNQ9NQ60 294 aa10.4□□□□□ -0.75
CLIP1-201ENST00000302528 TRPV5Q9NQA5 729 aa10.4□□□□□ -0.75
CLIP1-201ENST00000302528 ETNK2Q9NVF9 386 aa10.4□□□□□ -0.75
CLIP1-201ENST00000302528 TUBA8Q9NY65 449 aaPredicted RBP10.4□□□□□ -0.75
CLIP1-201ENST00000302528 SALL3Q9BXA9 1300 aa10.4□□□□□ -0.75
CLIP1-201ENST00000302528 CCNDBP1O95273 360 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 RLN2P04090 185 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 CYP17A1P05093 508 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 OGNP20774 298 aaKnown RBP10.39□□□□□ -0.75
CLIP1-201ENST00000302528 GRIA4P48058 902 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 CPSF6Q16630 551 aaKnown RBP eCLIP10.39□□□□□ -0.75
CLIP1-201ENST00000302528 HSDL1Q3SXM5 330 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 SPERTQ8NA61 448 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 OR52K1Q8NGK4 314 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 DIRAS2Q96HU8 199 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 MYOCQ99972 504 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 OSBPL11Q9BXB4 747 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 CLK4Q9HAZ1 481 aaKnown RBP10.39□□□□□ -0.75
CLIP1-201ENST00000302528 CIDEBQ9UHD4 219 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 DNPEPQ9ULA0 475 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 SAMD4AQ9UPU9 718 aaKnown RBP10.39□□□□□ -0.75
CLIP1-201ENST00000302528 R3HDM2Q9Y2K5 976 aaKnown RBP10.39□□□□□ -0.75
CLIP1-201ENST00000302528 RPTORQ8N122 1335 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 NPHP4O75161 1426 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-201ENST00000302528 DHRS12A0PJE2 317 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 TSPAN4O14817 238 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 CDC25CP30307 473 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 SSR2P43308 183 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF234Q14588 700 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 RRP1BQ14684 758 aaKnown RBP10.39□□□□□ -0.75
CLIP1-201ENST00000302528 CHSY3Q70JA7 882 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF720Q7Z2F6 126 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 AMIGO2Q86SJ2 522 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 DHDDSQ86SQ9 333 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 UBR7Q8N806 425 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 AP2M1Q96CW1 435 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 CEP295NLQ96MC4 621 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF639Q9UID6 485 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 AK5Q9Y6K8 562 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 COMMD3-BMI1R4GMX3 469 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 FRMPD1Q5SYB0 1578 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 VWDEQ8N2E2 1590 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 FAM237BA0A1B0GVD1 139 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 PSMD9O00233 223 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 LSM1O15116 133 aaKnown RBP10.39□□□□□ -0.75
CLIP1-201ENST00000302528 TSPAN1O60635 241 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 IL1R1P14778 569 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 GPD2P43304 727 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 CADM2Q8N3J6 435 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 METTL21AQ8WXB1 218 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 ART5Q96L15 291 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 TAPBPLQ9BX59 468 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 TM6SF2Q9BZW4 377 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 BRINP2Q9C0B6 783 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 MEMO1Q9Y316 297 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 PIK3C2BO00750 1634 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 CACNB4O00305 520 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-201ENST00000302528 INSRRP14616 1297 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 TSPAN8P19075 237 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 PSMB4P28070 264 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 SNAPC1Q16533 368 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 LRRC69Q6ZNQ3 347 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 NYAP1Q6ZVC0 841 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 OR2L8Q8NGY9 312 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 NDNQ99608 321 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 RMI1Q9H9A7 625 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 RNPEPL1Q9HAU8 725 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 A0A0G2JPF8 293 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 HNRNPCL3B7ZW38 293 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 APOC4-APOC2K7ER74 178 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 APOC2P02655 101 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 HNRNPCL4P0DMR1 293 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 MIPP30301 263 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 E2F2Q14209 437 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 PTPRNQ16849 979 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 PPP1R26Q5T8A7 1209 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-201ENST00000302528 FAM46CQ5VWP2 391 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 TXNDC11Q6PKC3 985 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 METTL7BQ6UX53 244 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 POLNQ7Z5Q5 900 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 ADAMTSL2Q86TH1 951 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 GPR65Q8IYL9 337 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms