RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ELMO2Q96JJ3 720 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 TUBGCP5Q96RT8 1024 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 CDCA3Q99618 268 aaPredicted RBP12.02□□□□□ -0.49
TPM3-202ENST00000302206 OMDQ99983 421 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 MECRQ9BV79 373 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 FBXO6Q9NRD1 293 aaPredicted RBP12.02□□□□□ -0.49
TPM3-202ENST00000302206 DZANK1Q9NVP4 752 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 SLC25A13Q9UJS0 675 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 CLEC4EQ9ULY5 219 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 VPS9D1Q9Y2B5 631 aa12.02□□□□□ -0.49
TPM3-202ENST00000302206 MRPS23Q9Y3D9 190 aaKnown RBP12.02□□□□□ -0.49
TPM3-202ENST00000302206 NUP210Q8TEM1 1887 aaPredicted RBP12.02□□□□□ -0.49
TPM3-202ENST00000302206 A0A1W2PQ67 120 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 TMEM114B3SHH9 223 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 G3V2L1 256 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 TRAFD1O14545 582 aaPredicted RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 PFDN6O15212 129 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 PHGDHO43175 533 aaKnown RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 SMAD6O43541 496 aaKnown RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 ZNF821O75541 412 aaPredicted RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 FSBPO95073 299 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 WISP3O95389 354 aaPredicted RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 PRAMEF12O95522 483 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 RALBP11234 206 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 PABPC1P11940 636 aaKnown RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 SRCP12931 536 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 CEBPBP17676 345 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 HLA-FP30511 346 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 SUOXP51687 545 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 SNRPD1P62314 119 aaKnown RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 NTHL1P78549 312 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 IRF9Q00978 393 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 BCL2L1Q07817 233 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 ASPHQ12797 758 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 SETDB1Q15047 1291 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 ATXN7L2Q5T6C5 722 aaPredicted RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 HECTD2Q5U5R9 776 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 ZYG11AQ6WRX3 759 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 RNF135Q8IUD6 432 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 C10orf107Q8IVU9 208 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 ARID3BQ8IVW6 561 aaPredicted RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 CEP97Q8IW35 865 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 CENPLQ8N0S6 344 aaPredicted RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 PCDH20Q8N6Y1 951 aaKnown RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 GPATCH11Q8N954 259 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 OR13C4Q8NGS5 318 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 TTC8Q8TAM2 541 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 PIH1D2Q8WWB5 315 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 BHMTQ93088 406 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 GPR78Q96P69 363 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 BBS2Q9BXC9 721 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 CPEB1Q9BZB8 566 aaKnown RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 FAM96AQ9H5X1 160 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 ATP13A3Q9H7F0 1226 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 TLE6Q9H808 572 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 SFXN1Q9H9B4 322 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 NPHS2Q9NP85 383 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 KCNK4Q9NYG8 393 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 PLK2Q9NYY3 685 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 MARCH4Q9P2E8 410 aaPredicted RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 PRDM4Q9UKN5 801 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 RUVBL2Q9Y230 463 aaKnown RBP12.01□□□□□ -0.49
TPM3-202ENST00000302206 VWA7Q9Y334 891 aa12.01□□□□□ -0.49
TPM3-202ENST00000302206 TARM1B6A8C7 271 aa12□□□□□ -0.49
TPM3-202ENST00000302206 K7ERQ8 282 aa12□□□□□ -0.49
TPM3-202ENST00000302206 AURKAO14965 403 aa12□□□□□ -0.49
TPM3-202ENST00000302206 PER2O15055 1255 aa12□□□□□ -0.49
TPM3-202ENST00000302206 STX7O15400 261 aaKnown RBP12□□□□□ -0.49
TPM3-202ENST00000302206 TRIM13O60858 407 aa12□□□□□ -0.49
TPM3-202ENST00000302206 SNUPNO95149 360 aaKnown RBP12□□□□□ -0.49
TPM3-202ENST00000302206 CSPG5O95196 566 aa12□□□□□ -0.49
TPM3-202ENST00000302206 F7P08709 466 aaPredicted RBP12□□□□□ -0.49
TPM3-202ENST00000302206 DLDP09622 509 aaKnown RBP12□□□□□ -0.49
TPM3-202ENST00000302206 PIRTP0C851 137 aa12□□□□□ -0.49
TPM3-202ENST00000302206 MYL2P10916 166 aa12□□□□□ -0.49
TPM3-202ENST00000302206 CD9P21926 228 aa12□□□□□ -0.49
TPM3-202ENST00000302206 FDXRP22570 491 aa12□□□□□ -0.49
TPM3-202ENST00000302206 SERPINA4P29622 427 aa12□□□□□ -0.49
TPM3-202ENST00000302206 NUMBP49757 651 aa12□□□□□ -0.49
TPM3-202ENST00000302206 STC1P52823 247 aa12□□□□□ -0.49
TPM3-202ENST00000302206 EPHB1P54762 984 aa12□□□□□ -0.49
TPM3-202ENST00000302206 PTPN5P54829 565 aa12□□□□□ -0.49
TPM3-202ENST00000302206 IRX4P78413 519 aa12□□□□□ -0.49
TPM3-202ENST00000302206 NHLH1Q02575 133 aa12□□□□□ -0.49
TPM3-202ENST00000302206 KCNC3Q14003 757 aa12□□□□□ -0.49
TPM3-202ENST00000302206 FAM83EQ2M2I3 478 aa12□□□□□ -0.49
TPM3-202ENST00000302206 FUT11Q495W5 492 aa12□□□□□ -0.49
TPM3-202ENST00000302206 AARS2Q5JTZ9 985 aaKnown RBP12□□□□□ -0.49
TPM3-202ENST00000302206 RBM20Q5T481 1227 aaKnown RBP12□□□□□ -0.49
TPM3-202ENST00000302206 AGAP9Q5VTM2 703 aa12□□□□□ -0.49
TPM3-202ENST00000302206 CES4AQ5XG92 561 aa12□□□□□ -0.49
TPM3-202ENST00000302206 LRRC8EQ6NSJ5 796 aa12□□□□□ -0.49
TPM3-202ENST00000302206 C22orf39Q6P5X5 142 aa12□□□□□ -0.49
TPM3-202ENST00000302206 ADGRD2Q7Z7M1 963 aa12□□□□□ -0.49
TPM3-202ENST00000302206 TBC1D1Q86TI0 1168 aaPredicted RBP12□□□□□ -0.49
TPM3-202ENST00000302206 ADGRG2Q8IZP9 1017 aa12□□□□□ -0.49
TPM3-202ENST00000302206 TMEM151AQ8N4L1 468 aa12□□□□□ -0.49
TPM3-202ENST00000302206 TTC16Q8NEE8 873 aa12□□□□□ -0.49
TPM3-202ENST00000302206 OR4K2Q8NGD2 314 aa12□□□□□ -0.49
TPM3-202ENST00000302206 OR2AP1Q8NGE2 309 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms