RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 RDH11Q8TC12 318 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 UNKQ9C0B0 810 aaKnown RBP22.3■■□□□ 1.16
SMAD1-201ENST00000302085 MAGEE1Q9HCI5 957 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 OXSMQ9NWU1 459 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 FKBPLQ9UIM3 349 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 STX7O15400 261 aaKnown RBP22.29■■□□□ 1.16
SMAD1-201ENST00000302085 FSBPO95073 299 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 WISP3O95389 354 aaPredicted RBP22.29■■□□□ 1.16
SMAD1-201ENST00000302085 ALPIP09923 528 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 MYL2P10916 166 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 GRIA4P48058 902 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 NRIP1P48552 1158 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 TIAL1Q01085 375 aaKnown RBP eCLIP22.29■■□□□ 1.16
SMAD1-201ENST00000302085 BNIP1Q12981 228 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 DUSP6Q16828 381 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 TMC5Q6UXY8 1006 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 GBP7Q8N8V2 638 aaPredicted RBP22.29■■□□□ 1.16
SMAD1-201ENST00000302085 OR2AP1Q8NGE2 309 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 EID2BQ96D98 161 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 LRRC37BQ96QE4 947 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 SORT1Q99523 831 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 ZMYND15Q9H091 742 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 ZNF711Q9Y462 761 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 CHD7Q9P2D1 2997 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 TRIM13O60858 407 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 DCTN3O75935 186 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 KITP10721 976 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 PMLP29590 882 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 CDKN1CP49918 316 aaPredicted RBP22.29■■□□□ 1.16
SMAD1-201ENST00000302085 ABCE1P61221 599 aaKnown RBP22.29■■□□□ 1.16
SMAD1-201ENST00000302085 RPL26P61254 145 aaKnown RBP22.29■■□□□ 1.16
SMAD1-201ENST00000302085 TSNAXIP1Q2TAA8 658 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 ELMSAN1Q6PJG2 1045 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 TMEM207Q6UWW9 146 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 TBC1D1Q86TI0 1168 aaPredicted RBP22.29■■□□□ 1.16
SMAD1-201ENST00000302085 ADIPOR2Q86V24 386 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 RYBPQ8N488 228 aaPredicted RBP22.29■■□□□ 1.16
SMAD1-201ENST00000302085 VN1R2Q8NFZ6 395 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 ISG20Q96AZ6 181 aaKnown RBP22.29■■□□□ 1.16
SMAD1-201ENST00000302085 OTUB2Q96DC9 234 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 MARCOQ9UEW3 520 aaPredicted RBP22.29■■□□□ 1.16
SMAD1-201ENST00000302085 SLCO3A1Q9UIG8 710 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 MID2Q9UJV3 735 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 RPL26L1Q9UNX3 145 aaKnown RBP22.29■■□□□ 1.16
SMAD1-201ENST00000302085 NUMBLQ9Y6R0 609 aa22.29■■□□□ 1.16
SMAD1-201ENST00000302085 ILF2Q12905 390 aaKnown RBP22.28■■□□□ 1.16
SMAD1-201ENST00000302085 CSHL1Q14406 222 aa22.28■■□□□ 1.16
SMAD1-201ENST00000302085 SETDB1Q15047 1291 aa22.28■■□□□ 1.16
SMAD1-201ENST00000302085 MYLK3Q32MK0 819 aa22.28■■□□□ 1.16
SMAD1-201ENST00000302085 FAM45BPQ6NSW5 357 aa22.28■■□□□ 1.16
SMAD1-201ENST00000302085 TTC8Q8TAM2 541 aa22.28■■□□□ 1.16
SMAD1-201ENST00000302085 FAM45AQ8TCE6 357 aa22.28■■□□□ 1.16
SMAD1-201ENST00000302085 ANKRD49Q8WVL7 239 aa22.28■■□□□ 1.16
SMAD1-201ENST00000302085 RSPRY1Q96DX4 576 aa22.28■■□□□ 1.16
SMAD1-201ENST00000302085 UBXN10Q96LJ8 280 aa22.28■■□□□ 1.16
SMAD1-201ENST00000302085 GPAMQ9HCL2 828 aa22.28■■□□□ 1.16
SMAD1-201ENST00000302085 MARK1Q9P0L2 795 aa22.28■■□□□ 1.16
SMAD1-201ENST00000302085 IL17CQ9P0M4 197 aa22.28■■□□□ 1.16
SMAD1-201ENST00000302085 TRIM24O15164 1050 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 SOCS5O75159 536 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 PAPLNO95428 1278 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 FDXRP22570 491 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 SNRPD1P62314 119 aaKnown RBP22.27■■□□□ 1.16
SMAD1-201ENST00000302085 PEX6Q13608 980 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 C22orf39Q6P5X5 142 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 LYSMD3Q7Z3D4 306 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 MTDHQ86UE4 582 aaKnown RBP22.27■■□□□ 1.16
SMAD1-201ENST00000302085 CELF5Q8N6W0 485 aaKnown RBP22.27■■□□□ 1.16
SMAD1-201ENST00000302085 ERP27Q96DN0 273 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 GATA5Q9BWX5 397 aaPredicted RBP22.27■■□□□ 1.16
SMAD1-201ENST00000302085 FAM96AQ9H5X1 160 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 ATP13A3Q9H7F0 1226 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 INTS10Q9NVR2 710 aaKnown RBP22.27■■□□□ 1.16
SMAD1-201ENST00000302085 KCNK4Q9NYG8 393 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 XPR1Q9UBH6 696 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 HEY2Q9UBP5 337 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 DNAJC16Q9Y2G8 782 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 MTF2Q9Y483 593 aaPredicted RBP22.27■■□□□ 1.16
SMAD1-201ENST00000302085 CHD9Q3L8U1 2897 aa22.27■■□□□ 1.16
SMAD1-201ENST00000302085 DLX3O60479 287 aa22.27■■□□□ 1.15
SMAD1-201ENST00000302085 CCDC166P0CW27 439 aa22.27■■□□□ 1.15
SMAD1-201ENST00000302085 MC4RP32245 332 aa22.27■■□□□ 1.15
SMAD1-201ENST00000302085 KIAA0907Q7Z7F0 614 aaPredicted RBP22.27■■□□□ 1.15
SMAD1-201ENST00000302085 PIM3Q86V86 326 aa22.27■■□□□ 1.15
SMAD1-201ENST00000302085 ZSWIM9Q86XI8 627 aa22.27■■□□□ 1.15
SMAD1-201ENST00000302085 PIANPQ8IYJ0 282 aa22.27■■□□□ 1.15
SMAD1-201ENST00000302085 NAT16Q8N8M0 369 aa22.27■■□□□ 1.15
SMAD1-201ENST00000302085 TCF12Q99081 682 aa22.27■■□□□ 1.15
SMAD1-201ENST00000302085 MRPL57Q9BQC6 102 aaKnown RBP22.27■■□□□ 1.15
SMAD1-201ENST00000302085 PBX4Q9BYU1 374 aa22.27■■□□□ 1.15
SMAD1-201ENST00000302085 GPR63Q9BZJ6 419 aa22.27■■□□□ 1.15
SMAD1-201ENST00000302085 NKX2-4Q9H2Z4 354 aa22.27■■□□□ 1.15
SMAD1-201ENST00000302085 SLC25A13Q9UJS0 675 aa22.27■■□□□ 1.15
SMAD1-201ENST00000302085 CORO1CQ9ULV4 474 aaPredicted RBP22.27■■□□□ 1.15
SMAD1-201ENST00000302085 ATG2AQ2TAZ0 1938 aa22.26■■□□□ 1.15
SMAD1-201ENST00000302085 H7C0S8 307 aa22.26■■□□□ 1.15
SMAD1-201ENST00000302085 SLC9A3R1O14745 358 aaPredicted RBP22.26■■□□□ 1.15
SMAD1-201ENST00000302085 LTA4HP09960 611 aaKnown RBP22.26■■□□□ 1.15
SMAD1-201ENST00000302085 XIAPP98170 497 aa22.26■■□□□ 1.15
SMAD1-201ENST00000302085 ECT2LQ008S8 904 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms