RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 FAR2Q96K12 515 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 NSMCE3Q96MG7 304 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 LTB4R2Q9NPC1 389 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 SCUBE2Q9NQ36 999 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 CHST12Q9NRB3 414 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.9□□□□□ -0.66
ZNF558-201ENST00000301475 IGKV6-21A0A0C4DH24 114 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 GPIP06744 558 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 TCEA1P23193 301 aaKnown RBP10.9□□□□□ -0.66
ZNF558-201ENST00000301475 S100A1P23297 94 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 BDNFP23560 247 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 TPTEP56180 551 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 PIGFQ07326 219 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 TUBA3CQ13748 450 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 KIF19Q2TAC6 998 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 OTUD3Q5T2D3 398 aaPredicted RBP10.9□□□□□ -0.66
ZNF558-201ENST00000301475 IL31Q6EBC2 164 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 FRA10AC1Q70Z53 315 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 R3HCC1LQ7Z5L2 792 aaKnown RBP10.9□□□□□ -0.66
ZNF558-201ENST00000301475 IFNEQ86WN2 208 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 ANKRD13BQ86YJ7 626 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 RNF135Q8IUD6 432 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 DEFB106AQ8N104 65 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 SLC22A17Q8WUG5 538 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 ELMO2Q96JJ3 720 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 DGCR6LQ9BY27 220 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 CXCL16Q9H2A7 254 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 EHD1Q9H4M9 534 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 WARS2Q9UGM6 360 aaKnown RBP10.9□□□□□ -0.66
ZNF558-201ENST00000301475 SUN2Q9UH99 717 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 ZNF639Q9UID6 485 aa10.9□□□□□ -0.66
ZNF558-201ENST00000301475 FAM47E-STBD1D6RA91 191 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 IPO13O94829 963 aaKnown RBP10.9□□□□□ -0.67
ZNF558-201ENST00000301475 UGT2B4P06133 528 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 ADORA2BP29275 332 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 SLC1A2P43004 574 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 NPY2RP49146 381 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 LAMC2Q13753 1193 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 CBX2Q14781 532 aaPredicted RBP10.9□□□□□ -0.67
ZNF558-201ENST00000301475 FAM83EQ2M2I3 478 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 RABL3Q5HYI8 236 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 RBM20Q5T481 1227 aaKnown RBP10.9□□□□□ -0.67
ZNF558-201ENST00000301475 FKBP1CQ5VVH2 108 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 BTBD8Q5XKL5 378 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 CRTC3Q6UUV7 619 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 SPARTQ8N0X7 666 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 MINDY1Q8N5J2 469 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 GOLM1Q8NBJ4 401 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 PPP1R16BQ96T49 567 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 KIFC1Q9BW19 673 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 GSTO2Q9H4Y5 243 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 ACAD9Q9H845 621 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 CDHR5Q9HBB8 845 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 HMG20AQ9NP66 347 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 POLE4Q9NR33 117 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 INTS10Q9NVR2 710 aaKnown RBP10.9□□□□□ -0.67
ZNF558-201ENST00000301475 NSMCE4AQ9NXX6 385 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 DPP3Q9NY33 737 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 SCHIP1Q9P0W5 487 aaPredicted RBP10.9□□□□□ -0.67
ZNF558-201ENST00000301475 KLQ9UEF7 1012 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 USP22Q9UPT9 525 aa10.9□□□□□ -0.67
ZNF558-201ENST00000301475 MAGEB16A2A368 324 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 MYO1DO94832 1006 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 SBF1O95248 1867 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 ALBP02768 609 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 FCGR1AP12314 374 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 TCF3P15923 654 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 CRHBPP24387 322 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 DNAJB1P25685 340 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 NOS2P35228 1153 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 LEPRP48357 1165 aaKnown RBP10.89□□□□□ -0.67
ZNF558-201ENST00000301475 GSK3BP49841 420 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 STX1BP61266 288 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 AMHR2Q16671 573 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 DPY19L1Q2PZI1 675 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 FNDC1Q4ZHG4 1894 aaPredicted RBP10.89□□□□□ -0.67
ZNF558-201ENST00000301475 IQSEC1Q6DN90 963 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 CNTN4Q8IWV2 1026 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 MFSD4AQ8N468 514 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 AFAP1L2Q8N4X5 818 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 Q8N9G6 341 aaPredicted RBP10.89□□□□□ -0.67
ZNF558-201ENST00000301475 FAM149B1Q96BN6 582 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 EFHD2Q96C19 240 aaPredicted RBP10.89□□□□□ -0.67
ZNF558-201ENST00000301475 C19orf60Q96EN9 201 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 IL12RB2Q99665 862 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 HOPXQ9BPY8 73 aaPredicted RBP10.89□□□□□ -0.67
ZNF558-201ENST00000301475 AKTIPQ9H8T0 292 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 C8orf4Q9NR00 106 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 MTRRQ9UBK8 725 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 KLHL3Q9UH77 587 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 ERVK-11Q9UQG0 969 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 MAGED1Q9Y5V3 778 aaPredicted RBP10.89□□□□□ -0.67
ZNF558-201ENST00000301475 NRCAMQ92823 1304 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 BBIP1A8MTZ0 92 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 I6L893 689 aaPredicted RBP10.89□□□□□ -0.67
ZNF558-201ENST00000301475 EEF2KO00418 725 aaKnown RBP10.89□□□□□ -0.67
ZNF558-201ENST00000301475 ERCC2P18074 760 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 GSTM2P28161 218 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 PCYT1AP49585 367 aa10.89□□□□□ -0.67
ZNF558-201ENST00000301475 ATP4BP51164 291 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms