RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 MID2Q9UJV3 735 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 PLXNA3P51805 1871 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 HDAC3O15379 428 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 SMAD6O43541 496 aaKnown RBP14.59□□□□□ -0.07
SMG8-201ENST00000300917 RPP40O75818 363 aaKnown RBP14.59□□□□□ -0.07
SMG8-201ENST00000300917 RHOBTB1O94844 696 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 BAG2O95816 211 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 WDR5P61964 334 aaKnown RBP14.59□□□□□ -0.07
SMG8-201ENST00000300917 PDAP1Q13442 181 aaKnown RBP14.59□□□□□ -0.07
SMG8-201ENST00000300917 TECRLQ5HYJ1 363 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 MRNIPQ6NTE8 343 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 PIANPQ8IYJ0 282 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 DEFB107AQ8IZN7 70 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 CDK5RAP1Q96SZ6 601 aaKnown RBP14.59□□□□□ -0.07
SMG8-201ENST00000300917 TTC1Q99614 292 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 ABCG8Q9H221 673 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 SLC7A8Q9UHI5 535 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 SSX2IPQ9Y2D8 614 aa14.59□□□□□ -0.07
SMG8-201ENST00000300917 MATN2O00339 956 aa14.58□□□□□ -0.07
SMG8-201ENST00000300917 TPBGLP0DKB5 382 aa14.58□□□□□ -0.07
SMG8-201ENST00000300917 ITGB6P18564 788 aa14.58□□□□□ -0.07
SMG8-201ENST00000300917 NSUN2Q08J23 767 aaKnown RBP eCLIP14.58□□□□□ -0.07
SMG8-201ENST00000300917 PSAPL1Q6NUJ1 521 aa14.58□□□□□ -0.07
SMG8-201ENST00000300917 SNX32Q86XE0 403 aa14.58□□□□□ -0.07
SMG8-201ENST00000300917 PLD4Q96BZ4 506 aa14.58□□□□□ -0.07
SMG8-201ENST00000300917 CORO1BQ9BR76 489 aa14.58□□□□□ -0.07
SMG8-201ENST00000300917 POLR3BQ9NW08 1133 aaPredicted RBP14.58□□□□□ -0.07
SMG8-201ENST00000300917 HCFC1R1Q9NWW0 138 aa14.58□□□□□ -0.07
SMG8-201ENST00000300917 UTP6Q9NYH9 597 aaKnown RBP14.58□□□□□ -0.07
SMG8-201ENST00000300917 CFAP97Q9P2B7 532 aa14.58□□□□□ -0.07
SMG8-201ENST00000300917 A0A087X1B8 175 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 TMEM114B3SHH9 223 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 UBXN8O00124 270 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 CD160O95971 181 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 ATP5F1P24539 256 aaPredicted RBP14.58□□□□□ -0.08
SMG8-201ENST00000300917 CSRP3P50461 194 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 KLF10Q13118 480 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 DBN1Q16643 649 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 PPP1R3AQ16821 1122 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 PREPLQ4J6C6 727 aaPredicted RBP14.58□□□□□ -0.08
SMG8-201ENST00000300917 RIPOR1Q6ZS17 1223 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 KIAA0408Q6ZU52 694 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 GAREM2Q75VX8 874 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 MFN1Q8IWA4 741 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 DCBLD1Q8N8Z6 715 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 CCDC97Q96F63 343 aaPredicted RBP14.58□□□□□ -0.08
SMG8-201ENST00000300917 GIMAP2Q9UG22 337 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 EVLQ9UI08 416 aaPredicted RBP14.58□□□□□ -0.08
SMG8-201ENST00000300917 PTGDR2Q9Y5Y4 395 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 ILVBLA1L0T0 632 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 H3BMM5 538 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 CCL16O15467 120 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 TGM5O43548 720 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 HNRNPCL1O60812 293 aaKnown RBP14.58□□□□□ -0.08
SMG8-201ENST00000300917 NDUFS3O75489 264 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 SRP72O76094 671 aaKnown RBP14.58□□□□□ -0.08
SMG8-201ENST00000300917 NME5P56597 212 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 PRKAA1Q13131 559 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 PFKFB4Q16877 469 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 LRRC73Q5JTD7 316 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 PAQR3Q6TCH7 311 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 BBS7Q8IWZ6 715 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 RNF168Q8IYW5 571 aaPredicted RBP14.58□□□□□ -0.08
SMG8-201ENST00000300917 SCG3Q8WXD2 468 aaKnown RBP14.58□□□□□ -0.08
SMG8-201ENST00000300917 ZFRQ96KR1 1074 aaKnown RBP14.58□□□□□ -0.08
SMG8-201ENST00000300917 TRIB3Q96RU7 358 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 TDRD1Q9BXT4 1180 aaKnown RBP14.58□□□□□ -0.08
SMG8-201ENST00000300917 VPS51Q9UID3 782 aa14.58□□□□□ -0.08
SMG8-201ENST00000300917 PTPRNQ16849 979 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 TSNAXIP1Q2TAA8 658 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 SPRED2Q7Z698 418 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 SDCCAG8Q86SQ7 713 aaPredicted RBP14.57□□□□□ -0.08
SMG8-201ENST00000300917 CCDC117Q8IWD4 279 aaPredicted RBP14.57□□□□□ -0.08
SMG8-201ENST00000300917 ADAMTS19Q8TE59 1207 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 NSUN5Q96P11 429 aaKnown RBP14.57□□□□□ -0.08
SMG8-201ENST00000300917 RANBP9Q96S59 729 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 FEM1AQ9BSK4 669 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 CCDC68Q9H2F9 335 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 NIPSNAP2O75323 286 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 COX4I1P13073 169 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 AOC1P19801 751 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 MC4RP32245 332 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 PTDSS1P48651 473 aaKnown RBP14.57□□□□□ -0.08
SMG8-201ENST00000300917 NUDT2P50583 147 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 GABPB2Q8TAK5 448 aaPredicted RBP14.57□□□□□ -0.08
SMG8-201ENST00000300917 TADA1Q96BN2 335 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 PANX3Q96QZ0 392 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 SLC30A3Q99726 388 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 CDYLQ9Y232 598 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 C15orf41Q9Y2V0 281 aa14.57□□□□□ -0.08
SMG8-201ENST00000300917 STX7O15400 261 aaKnown RBP14.56□□□□□ -0.08
SMG8-201ENST00000300917 CIB2O75838 187 aa14.56□□□□□ -0.08
SMG8-201ENST00000300917 FGF18O76093 207 aa14.56□□□□□ -0.08
SMG8-201ENST00000300917 IPO13O94829 963 aaKnown RBP14.56□□□□□ -0.08
SMG8-201ENST00000300917 CRTAMO95727 393 aa14.56□□□□□ -0.08
SMG8-201ENST00000300917 COL6A2P12110 1019 aa14.56□□□□□ -0.08
SMG8-201ENST00000300917 RAB33AQ14088 237 aa14.56□□□□□ -0.08
SMG8-201ENST00000300917 OR4D1Q15615 310 aa14.56□□□□□ -0.08
SMG8-201ENST00000300917 TPGS2Q68CL5 300 aa14.56□□□□□ -0.08
SMG8-201ENST00000300917 ACAD11Q709F0 780 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms