RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 CDH9Q9ULB4 789 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 OAS3Q9Y6K5 1087 aaKnown RBP12.08□□□□□ -0.48
PCF11-201ENST00000298281 MGAT1P26572 445 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 RARRES1P49788 294 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 PGM5Q15124 567 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 SLC15A2Q16348 729 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 LGI2Q8N0V4 545 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 GPR156Q8NFN8 814 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 OVCA2Q8WZ82 227 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 KCNQ5Q9NR82 932 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 ABCB10Q9NRK6 738 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 CLIC5Q9NZA1 410 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 ATXN2Q99700 1313 aaKnown RBP12.08□□□□□ -0.48
PCF11-201ENST00000298281 ZSCAN5CA6NGD5 496 aaPredicted RBP12.08□□□□□ -0.48
PCF11-201ENST00000298281 C9P02748 559 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 ATP5C1P36542 298 aaKnown RBP12.08□□□□□ -0.48
PCF11-201ENST00000298281 CASRP41180 1078 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 UNC93AQ86WB7 457 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 UROC1Q96N76 676 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 APBA2Q99767 749 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 ZNF471Q9BX82 626 aaPredicted RBP12.08□□□□□ -0.48
PCF11-201ENST00000298281 NKIRAS2Q9NYR9 191 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 ST3GAL5Q9UNP4 418 aa12.08□□□□□ -0.48
PCF11-201ENST00000298281 ZSCAN5BA6NJL1 495 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 COQ8BQ96D53 544 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 SETD4Q9NVD3 440 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 PCDH1Q08174 1060 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 IQSEC1Q6DN90 963 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 ADGRG6Q86SQ4 1221 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 RBM23Q86U06 439 aaKnown RBP12.07□□□□□ -0.48
PCF11-201ENST00000298281 ITGB1BP2Q9UKP3 347 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 VPS4AQ9UN37 437 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 MED31Q9Y3C7 131 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 TRPV2Q9Y5S1 764 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 WDR27A2RRH5 827 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 WASHC1A8K0Z3 465 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 WASH3PC4AMC7 463 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 OR10H3O60404 316 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 CSH1P0DML2 217 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 CSH2P0DML3 217 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 RFX5P48382 616 aaPredicted RBP12.07□□□□□ -0.48
PCF11-201ENST00000298281 TTPAP49638 278 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 PFKPQ01813 784 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 RIPK1Q13546 671 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 BMPR2Q13873 1038 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 GALNT18Q6P9A2 607 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 AAGABQ6PD74 315 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 SERPINA13PQ6UXR4 307 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 WASH2PQ6VEQ5 465 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 GPALPP1Q8IXQ4 340 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 OFCC1Q8IZS5 231 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 SNX33Q8WV41 574 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 C1QTNF3-AMACRE9PGA6 284 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 NPR2P20594 1047 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 CDC42P60953 191 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 AADACL4Q5VUY2 407 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 DEPDC4Q8N2C3 294 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 BPIFB6Q8NFQ5 453 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 MFSD3Q96ES6 412 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 CELF6Q96J87 481 aaKnown RBP12.07□□□□□ -0.48
PCF11-201ENST00000298281 CHCHD6Q9BRQ6 235 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 FANCFQ9NPI8 374 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 ADAM28Q9UKQ2 775 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 PGLSO95336 258 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 VEGFAP15692 232 aaPredicted RBP12.07□□□□□ -0.48
PCF11-201ENST00000298281 POLNQ7Z5Q5 900 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 AMER2Q8N7J2 671 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 GDPD5Q8WTR4 605 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 ZBTB10Q96DT7 871 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 KLHL5Q96PQ7 755 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 MARCH2Q9P0N8 246 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 CHADO15335 359 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 CAPGP40121 348 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 PLK1P53350 603 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 ZNF844Q08AG5 666 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 MFSD10Q14728 455 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 MINDY4Q4G0A6 757 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 KCNT2Q6UVM3 1135 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 UBE2Q1Q7Z7E8 422 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 ZCCHC9Q8N567 271 aaKnown RBP12.07□□□□□ -0.48
PCF11-201ENST00000298281 FBXO30Q8TB52 745 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 SELENOMQ8WWX9 145 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 HEPHQ9BQS7 1158 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 MLXQ9UH92 298 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 ZNF639Q9UID6 485 aa12.07□□□□□ -0.48
PCF11-201ENST00000298281 TBC1D3DA0A087WVF3 549 aa12.06□□□□□ -0.48
PCF11-201ENST00000298281 TBC1D3IA0A087WXS9 549 aa12.06□□□□□ -0.48
PCF11-201ENST00000298281 TBC1D3EA0A087X179 549 aa12.06□□□□□ -0.48
PCF11-201ENST00000298281 TBC1D3KA0A087X1G2 549 aa12.06□□□□□ -0.48
PCF11-201ENST00000298281 TBC1D3FA6NER0 549 aaPredicted RBP12.06□□□□□ -0.48
PCF11-201ENST00000298281 TBC1D3LB9A6J9 549 aa12.06□□□□□ -0.48
PCF11-201ENST00000298281 TBC1D3HP0C7X1 549 aa12.06□□□□□ -0.48
PCF11-201ENST00000298281 TSHRP16473 764 aa12.06□□□□□ -0.48
PCF11-201ENST00000298281 CTNNB1P35222 781 aa12.06□□□□□ -0.48
PCF11-201ENST00000298281 ST3GAL4Q11206 333 aa12.06□□□□□ -0.48
PCF11-201ENST00000298281 TBC1D3GQ6DHY5 549 aa12.06□□□□□ -0.48
PCF11-201ENST00000298281 TBC1D3CQ6IPX1 549 aa12.06□□□□□ -0.48
PCF11-201ENST00000298281 NEPROQ6NW34 567 aa12.06□□□□□ -0.48
PCF11-201ENST00000298281 CLVS1Q8IUQ0 354 aaPredicted RBP12.06□□□□□ -0.48
PCF11-201ENST00000298281 KATNAL2Q8IYT4 538 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms