RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 TMED2Q15363 201 aa24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 PACS1Q6VY07 963 aa24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 MICALCLQ6ZW33 695 aa24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 KRT222Q8N1A0 295 aa24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 GABRG3Q99928 467 aa24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 STMN4Q9H169 189 aaPredicted RBP24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 SUDS3Q9H7L9 328 aaPredicted RBP24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 DUSP12Q9UNI6 340 aa24.65■■□□□ 1.54
GTF2A1-201ENST00000298173 CCDC162PA2VCL2 907 aa24.64■■□□□ 1.53
GTF2A1-201ENST00000298173 STX7O15400 261 aaKnown RBP24.64■■□□□ 1.53
GTF2A1-201ENST00000298173 NTSR1P30989 418 aa24.64■■□□□ 1.53
GTF2A1-201ENST00000298173 WASP42768 502 aa24.64■■□□□ 1.53
GTF2A1-201ENST00000298173 PRAMEP78395 509 aa24.64■■□□□ 1.53
GTF2A1-201ENST00000298173 TSPAN33Q86UF1 283 aa24.64■■□□□ 1.53
GTF2A1-201ENST00000298173 EXOC3L1Q86VI1 746 aa24.64■■□□□ 1.53
GTF2A1-201ENST00000298173 IL17RCQ8NAC3 791 aa24.64■■□□□ 1.53
GTF2A1-201ENST00000298173 POLR3BQ9NW08 1133 aaPredicted RBP24.64■■□□□ 1.53
GTF2A1-201ENST00000298173 NSMCE4AQ9NXX6 385 aa24.64■■□□□ 1.53
GTF2A1-201ENST00000298173 C1orf232A0A0U1RR37 186 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 FOXO6A8MYZ6 492 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 UPK3BL1B0FP48 263 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 UPK3BL2E5RIL1 263 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 LHCGRP22888 699 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 ITGB7P26010 798 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 ATP5DP30049 168 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 GP5P40197 560 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 HADHAP40939 763 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 SERPINB9P50453 376 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 METAP1P53582 386 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 MAGOHP61326 146 aaKnown RBP24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 PTSQ03393 145 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 ZP2Q05996 745 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 THOC5Q13769 683 aaKnown RBP24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 C2orf27AQ580R0 203 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 GRTP1Q5TC63 336 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 TTC7BQ86TV6 843 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 TRABD2AQ86V40 505 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 LMNTD2Q8IXW0 634 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 GPR150Q8NGU9 434 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 OR6P1Q8NGX9 317 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 CALML6Q8TD86 181 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 FAM3CQ92520 227 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 ARRDC3Q96B67 414 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 B4GALT6Q9UBX8 382 aa24.63■■□□□ 1.53
GTF2A1-201ENST00000298173 IQANK1A0A1B0GTG1 560 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 KPNA3O00505 521 aaPredicted RBP24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 GOT2P00505 430 aaKnown RBP24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 GABRB3P28472 473 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 MRPS21P82921 87 aaKnown RBP24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 CCINQ13939 588 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 PARS2Q7L3T8 475 aaKnown RBP24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 PTAR1Q7Z6K3 402 aaPredicted RBP24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 STRA8Q7Z7C7 330 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 DSG4Q86SJ6 1040 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 DENND6AQ8IWF6 608 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 C2CD4AQ8NCU7 369 aaPredicted RBP24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 FAM167BQ9BTA0 163 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 RSPH9Q9H1X1 276 aaPredicted RBP24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 BPIFA1Q9NP55 256 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 BPTFQ12830 3046 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 OR51F1A6NGY5 319 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 ADAM23O75077 832 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 XIAPP98170 497 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 CTBP1Q13363 440 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 LGSNQ5TDP6 509 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 LRRC66Q68CR7 880 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 KIAA0408Q6ZU52 694 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 MMAAQ8IVH4 418 aaKnown RBP24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 CBARPQ8N350 705 aaPredicted RBP24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 OR4L1Q8NH43 312 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 PCDH12Q9NPG4 1184 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 PKP3Q9Y446 797 aa24.62■■□□□ 1.53
GTF2A1-201ENST00000298173 ZNF106Q9H2Y7 1883 aaKnown RBP24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 A8MX80 341 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 KRT38O76015 456 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 IL1BP01584 269 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 AHSGP02765 367 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 SNRPAP09012 282 aaKnown RBP24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 CNTFP26441 200 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 CSE1LP55060 971 aaKnown RBP24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 SEMG2Q02383 582 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 PEX6Q13608 980 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 POM121L1PQ3SYA9 428 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 FBXO43Q4G163 708 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 LRRC73Q5JTD7 316 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 GALNT7Q86SF2 657 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 CILP2Q8IUL8 1156 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 CNPY4Q8N129 248 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 RBBP8Q99708 897 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 CD248Q9HCU0 757 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 FKBPLQ9UIM3 349 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 FBXO5Q9UKT4 447 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 ACTL7BQ9Y614 415 aa24.61■■□□□ 1.53
GTF2A1-201ENST00000298173 A0A1W2PPM1 405 aa24.6■■□□□ 1.53
GTF2A1-201ENST00000298173 C19orf67A6NJJ6 358 aa24.6■■□□□ 1.53
GTF2A1-201ENST00000298173 KRT37O76014 449 aa24.6■■□□□ 1.53
GTF2A1-201ENST00000298173 SLC4A1P02730 911 aa24.6■■□□□ 1.53
GTF2A1-201ENST00000298173 CYP2A6P11509 494 aaPredicted RBP24.6■■□□□ 1.53
GTF2A1-201ENST00000298173 KRT15P19012 456 aa24.6■■□□□ 1.53
GTF2A1-201ENST00000298173 NFKBIAP25963 317 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms