RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 PGLSO95336 258 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 CBX2Q14781 532 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 CENPLQ8N0S6 344 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 RFWD2Q8NHY2 731 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 THAP1Q9NVV9 213 aa14.28□□□□□ -0.12
C9orf3-202ENST00000297979 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-202ENST00000297979 CHD7Q9P2D1 2997 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 SERPINE1P05121 402 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 SRCP12931 536 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 TYRP14679 529 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 PBX2P40425 430 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 CTSOP43234 321 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-202ENST00000297979 BCL2L1Q07817 233 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 HECTD2Q5U5R9 776 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 ASTLQ6HA08 431 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-202ENST00000297979 SDCCAG8Q86SQ7 713 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-202ENST00000297979 CAMK1DQ8IU85 385 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 GBP7Q8N8V2 638 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-202ENST00000297979 ITFG1Q8TB96 612 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 RPL10LQ96L21 214 aaKnown RBP14.27□□□□□ -0.12
C9orf3-202ENST00000297979 OLFM1Q99784 485 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 TNKS2Q9H2K2 1166 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 DCTN4Q9UJW0 460 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 CORO1CQ9ULV4 474 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-202ENST00000297979 HS3ST2Q9Y278 367 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 WNT6Q9Y6F9 365 aa14.27□□□□□ -0.12
C9orf3-202ENST00000297979 MYOFQ9NZM1 2061 aa14.27□□□□□ -0.13
C9orf3-202ENST00000297979 ZNF821O75541 412 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-202ENST00000297979 PABPC1P11940 636 aaKnown RBP14.27□□□□□ -0.13
C9orf3-202ENST00000297979 GRK2P25098 689 aa14.27□□□□□ -0.13
C9orf3-202ENST00000297979 STK19P49842 368 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-202ENST00000297979 DUSP6Q16828 381 aa14.27□□□□□ -0.13
C9orf3-202ENST00000297979 SPRED3Q2MJR0 410 aa14.27□□□□□ -0.13
C9orf3-202ENST00000297979 LY6G5CQ5SRR4 150 aa14.27□□□□□ -0.13
C9orf3-202ENST00000297979 C12orf76Q8N812 135 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-202ENST00000297979 PNPLA1Q8N8W4 532 aa14.27□□□□□ -0.13
C9orf3-202ENST00000297979 OR2AP1Q8NGE2 309 aa14.27□□□□□ -0.13
C9orf3-202ENST00000297979 RDH11Q8TC12 318 aa14.27□□□□□ -0.13
C9orf3-202ENST00000297979 POLR3BQ9NW08 1133 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-202ENST00000297979 SLC25A13Q9UJS0 675 aa14.27□□□□□ -0.13
C9orf3-202ENST00000297979 RUVBL2Q9Y230 463 aaKnown RBP14.27□□□□□ -0.13
C9orf3-202ENST00000297979 COMMD10Q9Y6G5 202 aa14.27□□□□□ -0.13
C9orf3-202ENST00000297979 NUP210Q8TEM1 1887 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 G3V2L1 256 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 SLC9A3R1O14745 358 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 SOCS5O75159 536 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 KLHL2O95198 593 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 PIGNO95427 931 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 RALBP11234 206 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 NRIP1P48552 1158 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 STC1P52823 247 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 RPL26P61254 145 aaKnown RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 SEMA3AQ14563 771 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 TYSND1Q2T9J0 566 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 DGKKQ5KSL6 1271 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 LRRC8EQ6NSJ5 796 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 TBC1D1Q86TI0 1168 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 CRLF3Q8IUI8 442 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 TTC8Q8TAM2 541 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 SREK1Q8WXA9 508 aaKnown RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 SCYL1Q96KG9 808 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 ATP13A3Q9H7F0 1226 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 ACTR5Q9H9F9 607 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 RPL26L1Q9UNX3 145 aaKnown RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 VWA7Q9Y334 891 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 ZNF711Q9Y462 761 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 A0A0G2JND7 137 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 TRAFD1O14545 582 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 STX7O15400 261 aaKnown RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 HTRA2O43464 458 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 DCTN3O75935 186 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 HOXB8P17481 243 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 PMLP29590 882 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 KPNA2P52292 529 aaKnown RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 SNRPD1P62314 119 aaKnown RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 FAM45BPQ6NSW5 357 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 C22orf39Q6P5X5 142 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 TMC5Q6UXY8 1006 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 RYBPQ8N488 228 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 FITM2Q8N6M3 262 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 FAM45AQ8TCE6 357 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 PIH1D2Q8WWB5 315 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 SCG3Q8WXD2 468 aaKnown RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 ISG20Q96AZ6 181 aaKnown RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 C20orf27Q9GZN8 174 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 LMAN2LQ9H0V9 348 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 ZNF395Q9H8N7 513 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 MAGEE1Q9HCI5 957 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 INTS10Q9NVR2 710 aaKnown RBP14.26□□□□□ -0.13
C9orf3-202ENST00000297979 MARK1Q9P0L2 795 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 CRYL1Q9Y2S2 319 aa14.26□□□□□ -0.13
C9orf3-202ENST00000297979 TK2O00142 265 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 DLDP09622 509 aaKnown RBP14.25□□□□□ -0.13
C9orf3-202ENST00000297979 MYL2P10916 166 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 GLRBP48167 497 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 SLC1A6P48664 564 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 ITGA9Q13797 1035 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 DMC1Q14565 340 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 PTPRRQ15256 657 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 ZYG11AQ6WRX3 759 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms