RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 HNRNPABQ99729 332 aaKnown RBP13.33□□□□□ -0.28
TNFRSF21-201ENST00000296861 VRTNQ9H8Y1 702 aa13.33□□□□□ -0.28
TNFRSF21-201ENST00000296861 EIF2B3Q9NR50 452 aaKnown RBP13.33□□□□□ -0.28
TNFRSF21-201ENST00000296861 ANKRD6Q9Y2G4 727 aa13.33□□□□□ -0.28
TNFRSF21-201ENST00000296861 TCAF1Q9Y4C2 921 aa13.33□□□□□ -0.28
TNFRSF21-201ENST00000296861 ARL5AQ9Y689 179 aa13.33□□□□□ -0.28
TNFRSF21-201ENST00000296861 SHROOM3Q8TF72 1996 aa13.33□□□□□ -0.28
TNFRSF21-201ENST00000296861 CCL15-CCL14A0A0B4J2E2 113 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 PDHXO00330 501 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 BTN3A1O00481 513 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 FFAR3O14843 346 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 GPR42O15529 346 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 SBK3P0C264 359 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 KCNC1P48547 511 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 IST1P53990 364 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 C21orf59P57076 290 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 CCL15Q16663 113 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 C14orf80Q86SX3 495 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 SNX29P2Q8IUI4 249 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 OR2T34Q8NGX1 318 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 OR2T3Q8NH03 318 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 CLHC1Q8NHS4 586 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 BEGAINQ9BUH8 593 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 AP5M1Q9H0R1 490 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 EPS8L2Q9H6S3 715 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 SMOXQ9NWM0 555 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 NSMCE4AQ9NXX6 385 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 ACTL7AQ9Y615 435 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 A0A087WXM4 84 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 E5RI56 91 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 FBP2O00757 339 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 FYNP06241 537 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 RBP1P09455 135 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 SERPINH1P50454 418 aaKnown RBP13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 PAFAH1B3Q15102 231 aaKnown RBP13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 RAP1GAP2Q684P5 730 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 SH3RF2Q8TEC5 729 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 TWIST2Q8WVJ9 160 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 CENPIQ92674 756 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 MTFMTQ96DP5 389 aaKnown RBP13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 ANGPTL3Q9Y5C1 460 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 USP3Q9Y6I4 520 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 NOBOXO60393 691 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 NDUFS3O75489 264 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 MMP3P08254 477 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 PRDX6P30041 224 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 MTPNP58546 118 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 CBX3Q13185 183 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 LAPTM4AQ15012 233 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 ADRM1Q16186 407 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 PSMD5Q16401 504 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 ZRANB3Q5FWF4 1079 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 FGD3Q5JSP0 725 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 PAQR9Q6ZVX9 377 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 CAMK1DQ8IU85 385 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 DDHD1Q8NEL9 900 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 PSMG2Q969U7 264 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 SEMA3CQ99985 751 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 C17orf80Q9BSJ5 609 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 ALG2Q9H553 416 aa13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 MRPL40Q9NQ50 206 aaKnown RBP13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 POLR2AP24928 1970 aaKnown RBP13.32□□□□□ -0.28
TNFRSF21-201ENST00000296861 SYCE1LA8MT33 242 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 SYNCRIPO60506 623 aaKnown RBP13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 SNAP29O95721 258 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 CHEK2O96017 543 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 OCM2P0CE71 109 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 OCMP0CE72 109 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 ELK4P28324 431 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 EGFL8Q99944 293 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 TRIM15Q9C019 465 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 CATSPERBQ9H7T0 1116 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 SLAMF8Q9P0V8 285 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 MYO1GB0I1T2 1018 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 GLP2RO95838 553 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 F9P00740 461 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 CYP4B1P13584 511 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 FUT4P22083 530 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 TSTA3Q13630 321 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 GTF2H3Q13889 308 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 OTUD1Q5VV17 481 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 KCTD8Q6ZWB6 473 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 FBXO39Q8N4B4 442 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 FIBCD1Q8N539 461 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 TMCO5AQ8N6Q1 288 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 PPTC7Q8NI37 304 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 ZFP14Q9HCL3 533 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 WDR6Q9NNW5 1121 aaKnown RBP13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 LTB4R2Q9NPC1 389 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 TPD52L2O43399 206 aaKnown RBP13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 ZNF26P17031 533 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 CA8P35219 290 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 YBX1P67809 324 aaKnown RBP13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 TSTD2Q5T7W7 516 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 FRA10AC1Q70Z53 315 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 RETREG3Q86VR2 466 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 RIN3Q8TB24 985 aa13.31□□□□□ -0.28
TNFRSF21-201ENST00000296861 TSPAN17Q96FV3 270 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms