RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TBC1D3HP0C7X1 549 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 CRABP2P29373 138 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 MTTPP55157 894 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 TBC1D3GQ6DHY5 549 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 TBC1D3CQ6IPX1 549 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 TBC1D3Q8IZP1 549 aaPredicted RBP13.46□□□□□ -0.25
HPS3-201ENST00000296051 C1orf127Q8N9H9 656 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 OSCP1Q8WVF1 389 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 BTBD9Q96Q07 612 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 HBEGFQ99075 208 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 MRPL45Q9BRJ2 306 aaKnown RBP13.46□□□□□ -0.25
HPS3-201ENST00000296051 ACTR8Q9H981 624 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 FAM32AQ9Y421 112 aaKnown RBP13.46□□□□□ -0.25
HPS3-201ENST00000296051 ARIH2O95376 493 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 TNNI3P19429 210 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 SNRPD1P62314 119 aaKnown RBP13.46□□□□□ -0.25
HPS3-201ENST00000296051 VPS26BQ4G0F5 336 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 TIGD2Q4W5G0 525 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 IL23RQ5VWK5 629 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 PIWIL4Q7Z3Z4 852 aaKnown RBP13.46□□□□□ -0.25
HPS3-201ENST00000296051 GLT6D1Q7Z4J2 308 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 FAM35AQ86V20 835 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 C11orf84Q9BUA3 381 aaPredicted RBP13.46□□□□□ -0.25
HPS3-201ENST00000296051 DYRK1BQ9Y463 629 aa13.46□□□□□ -0.25
HPS3-201ENST00000296051 MYO18AQ92614 2054 aaKnown RBP13.46□□□□□ -0.26
HPS3-201ENST00000296051 TMEM233B4DJY2 109 aa13.46□□□□□ -0.26
HPS3-201ENST00000296051 C1QTNF3-AMACRE9PGA6 284 aa13.46□□□□□ -0.26
HPS3-201ENST00000296051 CCND3P30281 292 aaPredicted RBP13.46□□□□□ -0.26
HPS3-201ENST00000296051 CCT8P50990 548 aa13.46□□□□□ -0.26
HPS3-201ENST00000296051 RABGGTBP53611 331 aa13.46□□□□□ -0.26
HPS3-201ENST00000296051 RUNX1T1Q06455 604 aa13.46□□□□□ -0.26
HPS3-201ENST00000296051 MTA1Q13330 715 aa13.46□□□□□ -0.26
HPS3-201ENST00000296051 KLF1Q13351 362 aaPredicted RBP13.46□□□□□ -0.26
HPS3-201ENST00000296051 PGS1Q32NB8 556 aa13.46□□□□□ -0.26
HPS3-201ENST00000296051 ANKS6Q68DC2 871 aa13.46□□□□□ -0.26
HPS3-201ENST00000296051 ZC3H3Q8IXZ2 948 aaKnown RBP13.46□□□□□ -0.26
HPS3-201ENST00000296051 CXorf40AQ8TE69 158 aa13.46□□□□□ -0.26
HPS3-201ENST00000296051 HPS1Q92902 700 aa13.46□□□□□ -0.26
HPS3-201ENST00000296051 FAM120BQ96EK7 910 aaKnown RBP13.46□□□□□ -0.26
HPS3-201ENST00000296051 MED8Q96G25 268 aa13.46□□□□□ -0.26
HPS3-201ENST00000296051 TBC1D13Q9NVG8 400 aa13.46□□□□□ -0.26
HPS3-201ENST00000296051 J3QRK9 145 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 ARVCFO00192 962 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 MDM4O15151 490 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 CCR10P46092 362 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 RAB10P61026 200 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 CDCA2Q69YH5 1023 aaPredicted RBP13.45□□□□□ -0.26
HPS3-201ENST00000296051 PSRC1Q6PGN9 363 aaPredicted RBP13.45□□□□□ -0.26
HPS3-201ENST00000296051 ARHGAP36Q6ZRI8 547 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 OTOP3Q7RTS5 596 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 SLC22A9Q8IVM8 553 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 SFRP1Q8N474 314 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 UTP15Q8TED0 518 aaKnown RBP13.45□□□□□ -0.26
HPS3-201ENST00000296051 NRG4Q8WWG1 115 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 CLEC4DQ8WXI8 215 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 FBXL8Q96CD0 374 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 RAD21L1Q9H4I0 556 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.45□□□□□ -0.26
HPS3-201ENST00000296051 PHLPP1O60346 1717 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 SPEF2Q9C093 1822 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 HACD1B0YJ81 288 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 DYRK3O43781 588 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 TFPTP0C1Z6 253 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 CLCNKBP51801 687 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 MPP1Q00013 466 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 NRG1Q02297 640 aaPredicted RBP13.45□□□□□ -0.26
HPS3-201ENST00000296051 GPM6BQ13491 265 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 C1orf220Q5T0J3 134 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 XKR5Q6UX68 686 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 CFAP52Q8N1V2 620 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 CCDC185Q8N715 623 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 LRRC52Q8N7C0 313 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 OR7A2PQ8NGA2 310 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 OR6K2Q8NGY2 324 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 C12orf42Q96LP6 360 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 TWNKQ96RR1 684 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 TBL1YQ9BQ87 522 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 POLR1EQ9GZS1 481 aaKnown RBP13.45□□□□□ -0.26
HPS3-201ENST00000296051 MORF4L1Q9UBU8 362 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 CLIC3O95833 236 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 ALDH4A1P30038 563 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 ADGRE1Q14246 886 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 TMEM63BQ5T3F8 832 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 C9orf57Q5W0N0 161 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 GALNT18Q6P9A2 607 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 ZNF276Q8N554 614 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 SLC4A11Q8NBS3 891 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 NPLOC4Q8TAT6 608 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 CLEC4CQ8WTT0 213 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 PKP2Q99959 881 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 ABCG8Q9H221 673 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 ST6GALNAC4Q9H4F1 302 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 HMG20AQ9NP66 347 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 ADAMTS6Q9UKP5 1117 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 PTPRJQ12913 1337 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 BTN3A1O00481 513 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 CYP2A6P11509 494 aaPredicted RBP13.45□□□□□ -0.26
HPS3-201ENST00000296051 ZNF7P17097 686 aaPredicted RBP13.45□□□□□ -0.26
HPS3-201ENST00000296051 PFKPQ01813 784 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 UBXN2BQ14CS0 331 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms