RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 ZFP36L1Q07352 338 aaKnown RBP9.33□□□□□ -0.92
CNOT9-202ENST00000295701 ELP6Q0PNE2 266 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 RALGDSQ12967 914 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 CA9Q16790 459 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 CLEC16AQ2KHT3 1053 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 OGFOD3Q6PK18 319 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 LVRNQ6Q4G3 990 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 ARHGAP36Q6ZRI8 547 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 USP53Q70EK8 1073 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 TAF8Q7Z7C8 310 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 DNAAF5Q86Y56 855 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 TP53INP2Q8IXH6 220 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 TSEN2Q8NCE0 465 aaKnown RBP9.33□□□□□ -0.92
CNOT9-202ENST00000295701 FAM46DQ8NEK8 389 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 JPH3Q8WXH2 748 aaPredicted RBP9.33□□□□□ -0.92
CNOT9-202ENST00000295701 USP7Q93009 1102 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 ZNF837Q96EG3 531 aaPredicted RBP9.33□□□□□ -0.92
CNOT9-202ENST00000295701 SGF29Q96ES7 293 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 WDR92Q96MX6 357 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 RBM15Q96T37 977 aaKnown RBP eCLIP9.33□□□□□ -0.92
CNOT9-202ENST00000295701 STRADBQ9C0K7 418 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 TMEM168Q9H0V1 697 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 LRRC19Q9H756 370 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 SUDS3Q9H7L9 328 aaPredicted RBP9.33□□□□□ -0.92
CNOT9-202ENST00000295701 FGF22Q9HCT0 170 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 UBA2Q9UBT2 640 aaPredicted RBP9.33□□□□□ -0.92
CNOT9-202ENST00000295701 DYRK1BQ9Y463 629 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 PCDHGA7Q9Y5G6 932 aa9.33□□□□□ -0.92
CNOT9-202ENST00000295701 SPTA1P02549 2419 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 SIGLEC16A6NMB1 481 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 B4DGG1 531 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 C9orf172C9J069 976 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 NVLO15381 856 aaKnown RBP9.32□□□□□ -0.92
CNOT9-202ENST00000295701 ARHGAP6O43182 974 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 B4GAT1O43505 415 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 RECQL5O94762 991 aaPredicted RBP9.32□□□□□ -0.92
CNOT9-202ENST00000295701 FUCA1P04066 466 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 FAM87AP0C7U9 286 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 HTR1BP28222 390 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 CCKBRP32239 447 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 NSFP46459 744 aaKnown RBP9.32□□□□□ -0.92
CNOT9-202ENST00000295701 PAPOLAP51003 745 aaKnown RBP9.32□□□□□ -0.92
CNOT9-202ENST00000295701 MAZP56270 477 aaKnown RBP9.32□□□□□ -0.92
CNOT9-202ENST00000295701 GSCP56915 257 aaPredicted RBP9.32□□□□□ -0.92
CNOT9-202ENST00000295701 OR1D5P58170 312 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 YBEYP58557 167 aaPredicted RBP9.32□□□□□ -0.92
CNOT9-202ENST00000295701 C16orf72Q14CZ0 275 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 KRT31Q15323 416 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 EFHC2Q5JST6 749 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 CERCAMQ5T4B2 595 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 LIPIQ6XZB0 460 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 SRLQ86TD4 932 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 PHF13Q86YI8 300 aaPredicted RBP9.32□□□□□ -0.92
CNOT9-202ENST00000295701 UMODL1-AS1Q8N2C9 162 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 HCAR2Q8TDS4 363 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 HTR3CQ8WXA8 447 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 CASKIN2Q8WXE0 1202 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 TMEM74Q96NL1 305 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 MCEEQ96PE7 176 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 SLC39A8Q9C0K1 460 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 RDH14Q9HBH5 336 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 CYP4F12Q9HCS2 524 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 RAB6BQ9NRW1 208 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 SPATS2LQ9NUQ6 558 aaKnown RBP9.32□□□□□ -0.92
CNOT9-202ENST00000295701 LRIT1Q9P2V4 623 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 MOSPD1Q9UJG1 213 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 APPL1Q9UKG1 709 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 SIK3Q9Y2K2 1263 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 ATP8A1Q9Y2Q0 1164 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 GTF3C3Q9Y5Q9 886 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 DGKBQ9Y6T7 804 aa9.32□□□□□ -0.92
CNOT9-202ENST00000295701 TLN1Q9Y490 2541 aaKnown RBP9.32□□□□□ -0.92
CNOT9-202ENST00000295701 TEX33O43247 280 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 PRAMEF11O60813 436 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 LIPCP11150 499 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 CCL4P13236 92 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 GLB1P16278 677 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 STAT1P42224 750 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 SUOXP51687 545 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 ARSDP51689 593 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 ZNF143P52747 638 aaPredicted RBP9.31□□□□□ -0.92
CNOT9-202ENST00000295701 TPI1P60174 286 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 B4GALNT1Q00973 533 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 EIF3IQ13347 325 aaKnown RBP9.31□□□□□ -0.92
CNOT9-202ENST00000295701 MTM1Q13496 603 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 HLTFQ14527 1009 aaKnown RBP eCLIP9.31□□□□□ -0.92
CNOT9-202ENST00000295701 CLCA4Q14CN2 919 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 PTPRRQ15256 657 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 TBR1Q16650 682 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 AMZ1Q400G9 498 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 PARP15Q460N3 678 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 C14orf28Q4W4Y0 310 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 MANEAQ5SRI9 462 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 PHF19Q5T6S3 580 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 SPECC1LQ69YQ0 1117 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 ERAP2Q6P179 960 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 TRIM72Q6ZMU5 477 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 ZNF574Q6ZN55 896 aaPredicted RBP9.31□□□□□ -0.92
CNOT9-202ENST00000295701 MON1BQ7L1V2 547 aa9.31□□□□□ -0.92
CNOT9-202ENST00000295701 SPRED1Q7Z699 444 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms