RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 NTAN1Q96AB6 310 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 PLEKHA8Q96JA3 519 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 TMEM74Q96NL1 305 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 SLC39A8Q9C0K1 460 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 FANCEQ9HB96 536 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 CRTAC1Q9NQ79 661 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 DGKBQ9Y6T7 804 aa14.73□□□□□ -0.05
CCNF-201ENST00000293968 LDLRP01130 860 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 CD86P42081 329 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 IFNLR1Q8IU57 520 aaPredicted RBP14.72□□□□□ -0.05
CCNF-201ENST00000293968 FUNDC1Q8IVP5 155 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 ZC3H7AQ8IWR0 971 aaKnown RBP14.72□□□□□ -0.05
CCNF-201ENST00000293968 CLYBLQ8N0X4 340 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 C2CD4AQ8NCU7 369 aaPredicted RBP14.72□□□□□ -0.05
CCNF-201ENST00000293968 CALML6Q8TD86 181 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 C16orf70Q9BSU1 422 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 RPF2Q9H7B2 306 aaKnown RBP14.72□□□□□ -0.05
CCNF-201ENST00000293968 ENTPD7Q9NQZ7 604 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 UBXN8O00124 270 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 DYNC1LI2O43237 492 aaPredicted RBP14.72□□□□□ -0.05
CCNF-201ENST00000293968 BCL10O95999 233 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 ELK4P28324 431 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 ARCN1P48444 511 aaKnown RBP14.72□□□□□ -0.05
CCNF-201ENST00000293968 KCNC1P48547 511 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 FOXA1P55317 472 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 FAM45BPQ6NSW5 357 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 EPHX4Q8IUS5 362 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 FAM45AQ8TCE6 357 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 BLOC1S5Q8TDH9 187 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 DCPSQ96C86 337 aaKnown RBP14.72□□□□□ -0.05
CCNF-201ENST00000293968 SLC9A7Q96T83 725 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 DGCR6LQ9BY27 220 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 MRGBPQ9NV56 204 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 SMPD3Q9NY59 655 aaPredicted RBP14.72□□□□□ -0.05
CCNF-201ENST00000293968 RPS9P46781 194 aaKnown RBP14.72□□□□□ -0.05
CCNF-201ENST00000293968 DNAJB13P59910 316 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 PFKPQ01813 784 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 RALGPS2Q86X27 583 aaPredicted RBP14.72□□□□□ -0.05
CCNF-201ENST00000293968 ZBTB8BQ8NAP8 495 aaPredicted RBP14.72□□□□□ -0.05
CCNF-201ENST00000293968 BEGAINQ9BUH8 593 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 KCTD3Q9Y597 815 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 RAD54BQ9Y620 910 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 MGAMO43451 1857 aa14.72□□□□□ -0.05
CCNF-201ENST00000293968 CBFA2T3O75081 653 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 CLCN2P51788 898 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 DIO3P55073 304 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 YBX1P67809 324 aaKnown RBP14.71□□□□□ -0.05
CCNF-201ENST00000293968 SFSWAPQ12872 951 aaKnown RBP14.71□□□□□ -0.05
CCNF-201ENST00000293968 KIAA0319Q5VV43 1072 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 NT5C3BQ969T7 300 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 NDFIP2Q9NV92 336 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 CMTM6Q9NX76 183 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 SUN2Q9UH99 717 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 ANAPC2Q9UJX6 822 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 CASTOR2A6NHX0 329 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 ZBBXA8MT70 800 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 ZNF189O75820 626 aaPredicted RBP14.71□□□□□ -0.05
CCNF-201ENST00000293968 PTPRCAPQ14761 206 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 TIGD2Q4W5G0 525 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 TMTC4Q5T4D3 741 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 EGFLAMQ63HQ2 1017 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 LYSMD3Q7Z3D4 306 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 STK32CQ86UX6 486 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 TMCO5AQ8N6Q1 288 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 PPTC7Q8NI37 304 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 GSTO2Q9H4Y5 243 aa14.71□□□□□ -0.05
CCNF-201ENST00000293968 K7EPI3 171 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 AZIN1O14977 448 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 CCNA2P20248 432 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 NFKBIAP25963 317 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 CDKN2DP55273 166 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 SH3BP2P78314 561 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 IL1RL1Q01638 556 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 LIPEQ05469 1076 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 PERM1Q5SV97 790 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 MARCH8Q5T0T0 291 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 ELMSAN1Q6PJG2 1045 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 ALDH16A1Q8IZ83 802 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 ROPN1LQ96C74 230 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 LRRC58Q96CX6 371 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 CNGB3Q9NQW8 809 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 USP22Q9UPT9 525 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 DNAJC15Q9Y5T4 150 aa14.71□□□□□ -0.06
CCNF-201ENST00000293968 GNGT2O14610 69 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 GMNNO75496 209 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 IMPDH1P20839 514 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 MYF6P23409 242 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 IREB2P48200 963 aaKnown RBP14.7□□□□□ -0.06
CCNF-201ENST00000293968 CLCN5P51795 746 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 IMPG1Q17R60 797 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 Q6ZNX1 250 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 CENPSQ8N2Z9 138 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 DQX1Q8TE96 717 aaKnown RBP14.7□□□□□ -0.06
CCNF-201ENST00000293968 ESAMQ96AP7 390 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 NRBF2Q96F24 287 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 HOPXQ9BPY8 73 aaPredicted RBP14.7□□□□□ -0.06
CCNF-201ENST00000293968 ALG2Q9H553 416 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 GDAP2Q9NXN4 497 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 MAP10Q9P2G4 905 aa14.7□□□□□ -0.06
CCNF-201ENST00000293968 IFT80Q9P2H3 777 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms