RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 HACD3Q9P035 362 aa4.86□□□□□ -1.63
PPP1R9A-201ENST00000289495 PATJQ8NI35 1801 aa4.86□□□□□ -1.63
PPP1R9A-201ENST00000289495 PTPRDP23468 1912 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 TARM1B6A8C7 271 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 PRAMEF11O60813 436 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 SORBS2O94875 1100 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 GOT2P00505 430 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 PIRTP0C851 137 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 XRCC1P18887 633 aaPredicted RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 ACVRL1P37023 503 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 HSPA13P48723 471 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 AQP4P55087 323 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 RING1Q06587 406 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 RAD51Q06609 339 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 NSUN2Q08J23 767 aaKnown RBP eCLIP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 RFTN1Q14699 578 aaPredicted RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 TRIM71Q2Q1W2 868 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 ZNF789Q5FWF6 425 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 RASIP1Q5U651 963 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 KIAA1841Q6NSI8 718 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 ANKS3Q6ZW76 656 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 LRRC8DQ7L1W4 858 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 GLT6D1Q7Z4J2 308 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 PDSS2Q86YH6 399 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 OR52K2Q8NGK3 314 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 OR4L1Q8NH43 312 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 RIN3Q8TB24 985 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 PEX13Q92968 403 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.85□□□□□ -1.633e-6■■■■■ 30.9
PPP1R9A-201ENST00000289495 ZNF599Q96NL3 588 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 GPR78Q96P69 363 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 TRAPPC9Q96Q05 1148 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 TRIM15Q9C019 465 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 EBF3Q9H4W6 596 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 COMMD8Q9NX08 183 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 CCDC167Q9P0B6 97 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 DNMT3LQ9UJW3 386 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 RNF112Q9ULX5 631 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 FNDC3AQ9Y2H6 1198 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 TRAF6Q9Y4K3 522 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 IGLV3-10A0A075B6K4 115 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 TTC24A2A3L6 582 aaPredicted RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 TYW5A2RUC4 315 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 C2orf81A6NN90 581 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 ANGPT2O15123 496 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 ACSL4O60488 711 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 B4GALT3O60512 393 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 IGHA2P01877 340 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 JUNP05412 331 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 LINGO3P0C6S8 592 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 COL6A1P12109 1028 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 ATP5C1P36542 298 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 ARSDP51689 593 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 NKX3-2P78367 333 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 DUSP4Q13115 394 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 ZNF177Q13360 481 aaPredicted RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 BFSP2Q13515 415 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 REP15Q6BDI9 236 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 PIM3Q86V86 326 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 PCDH20Q8N6Y1 951 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 EFHBQ8N7U6 833 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 PDZD8Q8NEN9 1154 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 OR13J1Q8NGT2 312 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 SHKBP1Q8TBC3 707 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 BRSK1Q8TDC3 778 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 SEPT8Q92599 483 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 PBXIP1Q96AQ6 731 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 C19orf60Q96EN9 201 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 DCUN1D1Q96GG9 259 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 B3GALT6Q96L58 329 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 BTBD9Q96Q07 612 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 DDX50Q9BQ39 737 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 TRIM4Q9C037 500 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 FAM192AQ9GZU8 254 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 MAGEH1Q9H213 219 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 ATP13A1Q9HD20 1204 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 MID1IP1Q9NPA3 183 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 TAS2R13Q9NYV9 303 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 MARCH4Q9P2E8 410 aaPredicted RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 NYNRINQ9P2P1 1898 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 CCDC162PA2VCL2 907 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 SYCE1LA8MT33 242 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 E5RI56 91 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 NR5A2O00482 541 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 SNX2O60749 519 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 VPS26AO75436 327 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 S1PR4O95977 384 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 SNRPB2P08579 225 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 IRF1P10914 325 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 SELPP16109 830 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 TSPAN8P19075 237 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 IMPDH1P20839 514 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 CSRP3P50461 194 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 SCNN1BP51168 640 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 RPL26P61254 145 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 IRX1P78414 480 aaPredicted RBP4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 SP3Q02447 781 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 GNA12Q03113 381 aa4.85□□□□□ -1.63
PPP1R9A-201ENST00000289495 GPR17Q13304 367 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms