RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 TSPAN14Q8NG11 270 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 ANKRD49Q8WVL7 239 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 RMND5BQ96G75 393 aaPredicted RBP15.92■□□□□ 0.14
SMAD6-201ENST00000288840 MKS1Q9NXB0 559 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 MTF2Q9Y483 593 aaPredicted RBP15.92■□□□□ 0.14
SMAD6-201ENST00000288840 USP3Q9Y6I4 520 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 SF3B1O75533 1304 aaKnown RBP eCLIP15.92■□□□□ 0.148e-6■■■■■ 107
SMAD6-201ENST00000288840 ENPP3O14638 875 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 GRID2O43424 1007 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 RHOCP08134 193 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 MTHFD1P11586 935 aaKnown RBP15.92■□□□□ 0.14
SMAD6-201ENST00000288840 RPS24P62847 133 aaKnown RBP15.92■□□□□ 0.14
SMAD6-201ENST00000288840 PURAQ00577 322 aaKnown RBP15.92■□□□□ 0.14
SMAD6-201ENST00000288840 DDX39BQ13838 428 aaKnown RBP15.92■□□□□ 0.14
SMAD6-201ENST00000288840 KCNA10Q16322 511 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 RDH11Q8TC12 318 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 SPATA16Q9BXB7 569 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 ZFP14Q9HCL3 533 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 KIF13BQ9NQT8 1826 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 KNL1Q8NG31 2342 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 TYW5A2RUC4 315 aaKnown RBP15.92■□□□□ 0.14
SMAD6-201ENST00000288840 AZIN1O14977 448 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 VPS26AO75436 327 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 ATP6V1B2P21281 511 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 RPL5P46777 297 aaKnown RBP15.92■□□□□ 0.14
SMAD6-201ENST00000288840 OTUD1Q5VV17 481 aaPredicted RBP15.92■□□□□ 0.14
SMAD6-201ENST00000288840 ATG14Q6ZNE5 492 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 MFN1Q8IWA4 741 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 FIG4Q92562 907 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 PPM1MQ96MI6 270 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 KCTD14Q9BQ13 255 aaPredicted RBP15.92■□□□□ 0.14
SMAD6-201ENST00000288840 FBXO44Q9H4M3 255 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 TLR8Q9NR97 1041 aaKnown RBP15.92■□□□□ 0.14
SMAD6-201ENST00000288840 ZNHIT2Q9UHR6 403 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 VPS28Q9UK41 221 aa15.92■□□□□ 0.14
SMAD6-201ENST00000288840 CCDC162PA2VCL2 907 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 SH3BP5O60239 455 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 C1QAP02745 245 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 KCNQ1P51787 676 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 PHEXP78562 749 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 ADGRE1Q14246 886 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 SQLEQ14534 574 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 MON1AQ86VX9 555 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 GPR21Q99679 349 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 KIFC1Q9BW19 673 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 ZBTB26Q9HCK0 441 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 SSC5DA1L4H1 1573 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 NPEPPSL1A6NEC2 478 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 CLOCKO15516 846 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 HNRNPRO43390 633 aaKnown RBP15.91■□□□□ 0.14
SMAD6-201ENST00000288840 MAFKO60675 156 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 RNASEH2AO75792 299 aaKnown RBP15.91■□□□□ 0.14
SMAD6-201ENST00000288840 AIF1P55008 147 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 TRIM25Q14258 630 aaKnown RBP15.91■□□□□ 0.14
SMAD6-201ENST00000288840 BRMS1LQ5PSV4 323 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 OR52E8Q6IFG1 317 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 FBXL22Q6P050 247 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 IL27RAQ6UWB1 636 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 DEFB128Q7Z7B8 93 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 ANKRD23Q86SG2 305 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 OR4L1Q8NH43 312 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 ERLEC1Q96DZ1 483 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 MRGPRX2Q96LB1 330 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 ZBTB18Q99592 522 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 SLC25A51Q9H1U9 297 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 FASP25445 335 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 RPL10P27635 214 aaKnown RBP15.91■□□□□ 0.14
SMAD6-201ENST00000288840 C1QTNF8P60827 252 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 TRIM32Q13049 653 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 PCBP1Q15365 356 aaKnown RBP eCLIP15.91■□□□□ 0.14
SMAD6-201ENST00000288840 NADK2Q4G0N4 442 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 ATP6AP1LQ52LC2 224 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 CLYBLQ8N0X4 340 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 PARP8Q8N3A8 854 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 GALNT15Q8N3T1 639 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 CBR4Q8N4T8 237 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 LINC01465Q8N7H1 131 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 NAT16Q8N8M0 369 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 TWIST2Q8WVJ9 160 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 BAG5Q9UL15 447 aa15.91■□□□□ 0.14
SMAD6-201ENST00000288840 KANSL1LA0AUZ9 987 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 SDHDO14521 159 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 SLC2A4P14672 509 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 PRKAA2P54646 552 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 PAQR3Q6TCH7 311 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 B4GALNT2Q8NHY0 566 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 RNF217Q8TC41 542 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 GATA6Q92908 595 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 CCDC154A6NI56 674 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 IQCF5A8MTL0 148 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 ALDH2P05091 517 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 FESP07332 822 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 LBPP18428 481 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 SULT2A1Q06520 285 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 SIRPB2Q5JXA9 342 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 STK32CQ86UX6 486 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 CLHC1Q8NHS4 586 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 FBXO30Q8TB52 745 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 CCSER2Q9H7U1 834 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 AKTIPQ9H8T0 292 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms