RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 FAM45BPQ6NSW5 357 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 CHST9Q7L1S5 443 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 FAM45AQ8TCE6 357 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 CMTM5Q96DZ9 223 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 PLK2Q9NYY3 685 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 FAM50BQ9Y247 325 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 SSX2IPQ9Y2D8 614 aa19.3■□□□□ 0.68
BRAF-201ENST00000288602 WISP3O95389 354 aaPredicted RBP19.29■□□□□ 0.68
BRAF-201ENST00000288602 PSMG1O95456 288 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 MT-CO1P00395 513 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 HDCP19113 662 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 FMO4P31512 558 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 ZNF140P52738 457 aaPredicted RBP19.29■□□□□ 0.68
BRAF-201ENST00000288602 EPHB1P54762 984 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 ATXN7L2Q5T6C5 722 aaPredicted RBP19.29■□□□□ 0.68
BRAF-201ENST00000288602 RIPOR1Q6ZS17 1223 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 GALNT7Q86SF2 657 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 HERC2P3Q9BVR0 1158 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 RC3H2Q9HBD1 1191 aaKnown RBP19.29■□□□□ 0.68
BRAF-201ENST00000288602 SPG21Q9NZD8 308 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 VPS28Q9UK41 221 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 CPQQ9Y646 472 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 K7ERQ8 282 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 NRG2O14511 850 aaPredicted RBP19.29■□□□□ 0.68
BRAF-201ENST00000288602 PDE5AO76074 875 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 CRTAMO95727 393 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 FDXRP22570 491 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 STC1P52823 247 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 EPHB3P54753 998 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 TRAF2Q12933 501 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 ARMC3Q5W041 872 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 PIWIL4Q7Z3Z4 852 aaKnown RBP19.29■□□□□ 0.68
BRAF-201ENST00000288602 OR6K2Q8NGY2 324 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 NLE1Q9NVX2 485 aaPredicted RBP19.29■□□□□ 0.68
BRAF-201ENST00000288602 HSFX1Q9UBD0 423 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 CDYLQ9Y232 598 aa19.29■□□□□ 0.68
BRAF-201ENST00000288602 GPR39O43194 453 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 NPHS1O60500 1241 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 RBP1P09455 135 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 CLTBP09497 229 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 GJA1P17302 382 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 DNAJB13P59910 316 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 NSUN2Q08J23 767 aaKnown RBP eCLIP19.28■□□□□ 0.68
BRAF-201ENST00000288602 C1orf146Q5VVC0 180 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 HERC6Q8IVU3 1022 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 MAB21L3Q8N8X9 362 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 GPR150Q8NGU9 434 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 STMN2Q93045 179 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 FEM1AQ9BSK4 669 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 MRPL17Q9NRX2 175 aaKnown RBP19.28■□□□□ 0.68
BRAF-201ENST00000288602 ANKRD66B4E2M5 251 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 TBX10O75333 385 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 ITGAXP20702 1163 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 CSKP41240 450 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 WDR5P61964 334 aaKnown RBP19.28■□□□□ 0.68
BRAF-201ENST00000288602 SULT2A1Q06520 285 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 ASPHQ12797 758 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 RFTN1Q14699 578 aaPredicted RBP19.28■□□□□ 0.68
BRAF-201ENST00000288602 ACAD11Q709F0 780 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 OTOP2Q7RTS6 562 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 SDCCAG8Q86SQ7 713 aaPredicted RBP19.28■□□□□ 0.68
BRAF-201ENST00000288602 DDX53Q86TM3 631 aaKnown RBP19.28■□□□□ 0.68
BRAF-201ENST00000288602 LMNTD2Q8IXW0 634 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 DEFB107AQ8IZN7 70 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 HS6ST3Q8IZP7 471 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 CFAP61Q8NHU2 1237 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 TMA16Q96EY4 203 aaKnown RBP19.28■□□□□ 0.68
BRAF-201ENST00000288602 IL21Q9HBE4 155 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 MCM8Q9UJA3 840 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 PACSIN3Q9UKS6 424 aa19.28■□□□□ 0.68
BRAF-201ENST00000288602 H3BMM5 538 aa19.27■□□□□ 0.68
BRAF-201ENST00000288602 GREM1O60565 184 aa19.27■□□□□ 0.68
BRAF-201ENST00000288602 CD1DP15813 335 aa19.27■□□□□ 0.68
BRAF-201ENST00000288602 CCDC6Q16204 474 aa19.27■□□□□ 0.68
BRAF-201ENST00000288602 LRRC26Q2I0M4 334 aa19.27■□□□□ 0.68
BRAF-201ENST00000288602 METTL21CQ5VZV1 264 aa19.27■□□□□ 0.68
BRAF-201ENST00000288602 TCEAL8Q8IYN2 117 aa19.27■□□□□ 0.68
BRAF-201ENST00000288602 CCDC124Q96CT7 223 aaKnown RBP19.27■□□□□ 0.68
BRAF-201ENST00000288602 CNDP1Q96KN2 507 aa19.27■□□□□ 0.68
BRAF-201ENST00000288602 ZNF570Q96NI8 536 aa19.27■□□□□ 0.68
BRAF-201ENST00000288602 TM6SF2Q9BZW4 377 aa19.27■□□□□ 0.68
BRAF-201ENST00000288602 FKBPLQ9UIM3 349 aa19.27■□□□□ 0.68
BRAF-201ENST00000288602 WASF2Q9Y6W5 498 aa19.27■□□□□ 0.68
BRAF-201ENST00000288602 LRRC14BA6NHZ5 514 aa19.27■□□□□ 0.67
BRAF-201ENST00000288602 PRAMEF12O95522 483 aa19.27■□□□□ 0.67
BRAF-201ENST00000288602 PIK3R1P27986 724 aa19.27■□□□□ 0.67
BRAF-201ENST00000288602 GABRR2P28476 465 aa19.27■□□□□ 0.67
BRAF-201ENST00000288602 PDAP1Q13442 181 aaKnown RBP19.27■□□□□ 0.67
BRAF-201ENST00000288602 TAF1AQ15573 450 aaPredicted RBP19.27■□□□□ 0.67
BRAF-201ENST00000288602 FBXO48Q5FWF7 155 aa19.27■□□□□ 0.67
BRAF-201ENST00000288602 PSAPL1Q6NUJ1 521 aa19.27■□□□□ 0.67
BRAF-201ENST00000288602 PIANPQ8IYJ0 282 aa19.27■□□□□ 0.67
BRAF-201ENST00000288602 PEX13Q92968 403 aa19.27■□□□□ 0.67
BRAF-201ENST00000288602 YME1L1Q96TA2 773 aa19.27■□□□□ 0.67
BRAF-201ENST00000288602 POLR3BQ9NW08 1133 aaPredicted RBP19.27■□□□□ 0.67
BRAF-201ENST00000288602 GALPQ9UBC7 116 aa19.27■□□□□ 0.67
BRAF-201ENST00000288602 VTI1BQ9UEU0 232 aa19.27■□□□□ 0.67
BRAF-201ENST00000288602 DOCK6Q96HP0 2047 aa19.26■□□□□ 0.67
BRAF-201ENST00000288602 KIAA0100Q14667 2235 aaKnown RBP19.26■□□□□ 0.67
BRAF-201ENST00000288602 C2orf81A6NN90 581 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms