RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PTAR1Q7Z6K3 402 aaPredicted RBP10.4□□□□□ -0.74
SKA1-201ENST00000285116 ARHGAP12Q8IWW6 846 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 COLGALT2Q8IYK4 626 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 ZMIZ2Q8NF64 920 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 C17orf50Q8WW18 174 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 LPGAT1Q92604 370 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 TSPAN17Q96FV3 270 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 UBXN10Q96LJ8 280 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 POMKQ9H5K3 350 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 CDHR5Q9HBB8 845 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 DDIT4Q9NX09 232 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 GPC6Q9Y625 555 aaPredicted RBP10.4□□□□□ -0.74
SKA1-201ENST00000285116 ANKRD36A6QL64 1941 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 CLDN5O00501 218 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 MATN3O15232 486 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 NOL3O60936 208 aaKnown RBP10.4□□□□□ -0.74
SKA1-201ENST00000285116 IPO13O94829 963 aaKnown RBP10.4□□□□□ -0.74
SKA1-201ENST00000285116 SNRPB2P08579 225 aaKnown RBP10.4□□□□□ -0.74
SKA1-201ENST00000285116 CKMT2P17540 419 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 AKAP5P24588 427 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 SLC1A2P43004 574 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 ABCG1P45844 678 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 LEPRP48357 1165 aaKnown RBP10.4□□□□□ -0.74
SKA1-201ENST00000285116 BMXP51813 675 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 CAP1Q01518 475 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 PRKCQQ04759 706 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 TNK2Q07912 1038 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 SEPT6Q14141 434 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 SNX17Q15036 470 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 FAM83EQ2M2I3 478 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 COQ5Q5HYK3 327 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 FGD3Q5JSP0 725 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 C6orf10Q5SRN2 563 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 INTS11Q5TA45 600 aaKnown RBP10.4□□□□□ -0.74
SKA1-201ENST00000285116 ANKRD26P1Q6NSI1 321 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 PRMT9Q6P2P2 845 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 CNSTQ6PJW8 725 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 RANBP10Q6VN20 620 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 SMG8Q8ND04 991 aaKnown RBP10.4□□□□□ -0.74
SKA1-201ENST00000285116 GPRC5AQ8NFJ5 357 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 CALML6Q8TD86 181 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 HEXDCQ8WVB3 486 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 CASP10Q92851 521 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 PPWD1Q96BP3 646 aaKnown RBP10.4□□□□□ -0.74
SKA1-201ENST00000285116 ARMC7Q9H6L4 198 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 WDCPQ9H6R7 721 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 ABCD2Q9UBJ2 740 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 CDH9Q9ULB4 789 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 ERGIC3Q9Y282 383 aa10.4□□□□□ -0.74
SKA1-201ENST00000285116 KCNU1A8MYU2 1149 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 E7ENX8 843 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 GOLGA8TH3BQL2 631 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 TMX2-CTNND1H3BSU7 103 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 SMPD1P17405 629 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 TPH1P17752 444 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 EIF2B2P49770 351 aaKnown RBP10.4□□□□□ -0.75
SKA1-201ENST00000285116 MAP3K7CLP57077 242 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 TAS2R39P59534 338 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 RPS3AP61247 264 aaKnown RBP10.4□□□□□ -0.75
SKA1-201ENST00000285116 PMS2P3Q13401 168 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 FASTKQ14296 549 aaKnown RBP10.4□□□□□ -0.75
SKA1-201ENST00000285116 RAB39AQ14964 217 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 NR1D2Q14995 579 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 ACAP2Q15057 778 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 BRMS1LQ5PSV4 323 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 AGAP9Q5VTM2 703 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 EGFLAMQ63HQ2 1017 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 TIGD7Q6NT04 549 aaPredicted RBP10.4□□□□□ -0.75
SKA1-201ENST00000285116 CAMK1DQ8IU85 385 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 CPNE9Q8IYJ1 553 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 PCDH20Q8N6Y1 951 aaKnown RBP10.4□□□□□ -0.75
SKA1-201ENST00000285116 CNDP2Q96KP4 475 aaKnown RBP10.4□□□□□ -0.75
SKA1-201ENST00000285116 ASB2Q96Q27 587 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 OLFM1Q99784 485 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 HEPHQ9BQS7 1158 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 TBC1D13Q9NVG8 400 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 GIN1Q9NXP7 522 aa10.4□□□□□ -0.75
SKA1-201ENST00000285116 AQP12BA6NM10 295 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 CFAP99D6REC4 459 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 SOCS2O14508 198 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 PTGESO14684 152 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 UBDO15205 165 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 CNOT3O75175 753 aaKnown RBP10.39□□□□□ -0.75
SKA1-201ENST00000285116 GSTT2P0CG29 244 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 GSTT2BP0CG30 244 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 SMIM10L2AP0DMW4 78 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 SMIM10L2BP0DMW5 78 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 NCAM1P13591 858 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 CPB1P15086 417 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 RPL10P27635 214 aaKnown RBP10.39□□□□□ -0.75
SKA1-201ENST00000285116 MPP1Q00013 466 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 BNIP3Q12983 259 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 WSCD1Q658N2 575 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 GK5Q6ZS86 529 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 USP50Q70EL3 339 aaPredicted RBP10.39□□□□□ -0.75
SKA1-201ENST00000285116 ERMP1Q7Z2K6 904 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 AQP12AQ8IXF9 295 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 SMARCD1Q96GM5 515 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 OSMRQ99650 979 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 OMDQ99983 421 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms