RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PITPNBP48739 271 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 BMXP51813 675 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 WNT3P56703 355 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 STX1BP61266 288 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ELP6Q0PNE2 266 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 PDCLQ13371 301 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ALCAMQ13740 583 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 BAATQ14032 418 aaPredicted RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 GRM4Q14833 912 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 RPS6KA1Q15418 735 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ELAVL1Q15717 326 aaKnown RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 ZXDCQ2QGD7 858 aaPredicted RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 C15orf59Q2T9L4 293 aaPredicted RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 KRT71Q3SY84 523 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 EPHA10Q5JZY3 1008 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 SPDYCQ5MJ68 293 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 CBWD5Q5RIA9 395 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 AADACL4Q5VUY2 407 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 CST9Q5W186 159 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 DGAT2L7PQ6IED9 249 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 HEPHL1Q6MZM0 1159 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 SARM1Q6SZW1 724 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 MTHFD1LQ6UB35 978 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 PPP1R21Q6ZMI0 780 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ZNF365Q70YC5 407 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ATG9AQ7Z3C6 839 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 TLK2Q86UE8 772 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 HOOK3Q86VS8 718 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 CCDC13Q8IYE1 715 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 GPR135Q8IZ08 494 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 MYOCDQ8IZQ8 938 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 MPP5Q8N3R9 675 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 PDCL2Q8N4E4 241 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 SLC15A4Q8N697 577 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ANKRD44Q8N8A2 993 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 IL17RCQ8NAC3 791 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ATAD1Q8NBU5 361 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 RASSF8Q8NHQ8 419 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 URGCPQ8TCY9 931 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 EDAQ92838 391 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 TNPO1Q92973 898 aaKnown RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 SPSB4Q96A44 273 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ELP4Q96EB1 424 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 SAAL1Q96ER3 474 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 NAF1Q96HR8 494 aaKnown RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 MED15Q96RN5 788 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 KCNK16Q96T55 309 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 UHRF1Q96T88 793 aaPredicted RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 ERP44Q9BS26 406 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 SSBP3Q9BWW4 388 aaPredicted RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 GLIS2Q9BZE0 524 aaPredicted RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 MAGEE1Q9HCI5 957 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ZBTB26Q9HCK0 441 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 TLR9Q9NR96 1032 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 SPATS2LQ9NUQ6 558 aaKnown RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 ING3Q9NXR8 418 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 TMOD2Q9NZR1 351 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 CNIH4Q9P003 139 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 SH3BP4Q9P0V3 963 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 TEKT2Q9UIF3 430 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 TLK1Q9UKI8 766 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ZDHHC8Q9ULC8 765 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 MTUS1Q9ULD2 1270 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 MYRFQ9Y2G1 1151 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 GDAQ9Y2T3 454 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 PTRH2Q9Y3E5 179 aaKnown RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 TESMINQ9Y4I5 508 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ARFGEF2Q9Y6D5 1785 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 TTC41PQ6P2S7 1318 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 FAM205AQ6ZU69 1335 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 RPTORQ8N122 1335 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 WDR33Q9C0J8 1336 aaKnown RBP4.67□□□□□ -1.66
CD44-202ENST00000278385 COL4A5P29400 1685 aa4.67□□□□□ -1.66
CD44-202ENST00000278385 ZNF609O15014 1411 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 A0A0A6YYK5 440 aaPredicted RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 FAM237BA0A1B0GVD1 139 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 C16orf96A6NNT2 1141 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 GCOM1H8Y6P7 765 aaPredicted RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 MATN2O00339 956 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 SPOPO43791 374 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 TAF5LO75529 589 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 DDAH2O95865 285 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 GASTP01350 101 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 CYP1A2P05177 515 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 KRT5P13647 590 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 ERCC2P18074 760 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 ACVR2AP27037 513 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 RPA1P27694 616 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 SLC5A2P31639 672 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 GPD2P43304 727 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 PIK3CGP48736 1102 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 KHKP50053 298 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 STAT2P52630 851 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 ADARP55265 1226 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 CDH15P55291 814 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 FKBP1AP62942 108 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 YWHAZP63104 245 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 FAM189BP81408 668 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 PRKCEQ02156 737 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 TMEM115Q12893 351 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms