RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 A0A0J9YYE9 177 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 CLASP2O75122 1294 aaKnown RBP12.85□□□□□ -0.35
HERC6-202ENST00000273960 CCNKO75909 580 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 LDLRP01130 860 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 CYP4B1P13584 511 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 ALOX12P18054 663 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 FMO4P31512 558 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 ARL4AP40617 200 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 CLCN3P51790 818 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 LAPTM4AQ15012 233 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 STXBP5Q5T5C0 1151 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 EEF1DP3Q658K8 133 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 FRA10AC1Q70Z53 315 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 GPRASP2Q96D09 838 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 ZNF486Q96H40 463 aaPredicted RBP12.85□□□□□ -0.35
HERC6-202ENST00000273960 ADPRHL2Q9NX46 363 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 ACOT9Q9Y305 439 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 USP2O75604 605 aaPredicted RBP12.85□□□□□ -0.35
HERC6-202ENST00000273960 SUPT20HL2P0C7V6 817 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 CHRNB1P11230 501 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 KCNA2P16389 499 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 BMPR1AP36894 532 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 PITX1P78337 314 aaPredicted RBP12.85□□□□□ -0.35
HERC6-202ENST00000273960 SNAP47Q5SQN1 464 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 C9orf131Q5VYM1 1079 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 ZNF773Q6PK81 442 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 PLEKHG7Q6ZR37 379 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 BRSK2Q8IWQ3 736 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 SLC22A15Q8IZD6 547 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 RDH11Q8TC12 318 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 MCRS1Q96EZ8 462 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 C3orf30Q96M34 536 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 REXO4Q9GZR2 422 aaKnown RBP12.85□□□□□ -0.35
HERC6-202ENST00000273960 CCM2LQ9NUG4 571 aaPredicted RBP12.85□□□□□ -0.35
HERC6-202ENST00000273960 ANKMY1Q9P2S6 941 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 SYNPO2Q9UMS6 1093 aa12.85□□□□□ -0.35
HERC6-202ENST00000273960 CITO14578 2027 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 ZSCAN5BA6NJL1 495 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 CCL22O00626 93 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 GNGT2O14610 69 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 ALDH1A2O94788 518 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 LYPLA2O95372 231 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 SLC4A1P02730 911 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 HSPA1AP0DMV8 641 aaKnown RBP12.84□□□□□ -0.35
HERC6-202ENST00000273960 HSPA1BP0DMV9 641 aaKnown RBP12.84□□□□□ -0.35
HERC6-202ENST00000273960 UBA1P22314 1058 aaKnown RBP12.84□□□□□ -0.35
HERC6-202ENST00000273960 HLCSP50747 726 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 CAPSQ13938 189 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 LDB1Q86U70 411 aaPredicted RBP12.84□□□□□ -0.35
HERC6-202ENST00000273960 MMAAQ8IVH4 418 aaKnown RBP12.84□□□□□ -0.35
HERC6-202ENST00000273960 CPSF7Q8N684 471 aaKnown RBP12.84□□□□□ -0.35
HERC6-202ENST00000273960 DCBLD1Q8N8Z6 715 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 PTCD2Q8WV60 388 aaKnown RBP12.84□□□□□ -0.35
HERC6-202ENST00000273960 BEX2Q9BXY8 128 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 SPATC1LQ9H0A9 340 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 LRRC40Q9H9A6 602 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 SLAMF8Q9P0V8 285 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 PTBP2Q9UKA9 531 aaKnown RBP12.84□□□□□ -0.35
HERC6-202ENST00000273960 AKT3Q9Y243 479 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 PCDHB3Q9Y5E6 796 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 LRRC14BA6NHZ5 514 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 TRPC5OSA6NMA1 111 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 TXNP10599 105 aaKnown RBP12.84□□□□□ -0.35
HERC6-202ENST00000273960 RAB15P59190 212 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 CLDN10P78369 228 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 EPS8Q12929 822 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 HSDL1Q3SXM5 330 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 SCML4Q8N228 414 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 LILRB4Q8NHJ6 448 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 FEM1AQ9BSK4 669 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 FAM49AQ9H0Q0 323 aaPredicted RBP12.84□□□□□ -0.35
HERC6-202ENST00000273960 XYLT2Q9H1B5 865 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 TRPV5Q9NQA5 729 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 NUP205Q92621 2012 aa12.84□□□□□ -0.35
HERC6-202ENST00000273960 ZNF701M0R085 212 aaPredicted RBP12.83□□□□□ -0.35
HERC6-202ENST00000273960 FZD9O00144 591 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 PLA2G6O60733 806 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 LRIG2O94898 1065 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 UGT2B4P06133 528 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 TCF3P15923 654 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 CLPPQ16740 277 aaPredicted RBP12.83□□□□□ -0.35
HERC6-202ENST00000273960 NCBP2-AS2Q69YL0 99 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 XAF1Q6GPH4 301 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 CUZD1Q86UP6 607 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 FAM83FQ8NEG4 500 aaPredicted RBP12.83□□□□□ -0.35
HERC6-202ENST00000273960 HEXDCQ8WVB3 486 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 ZBED3Q96IU2 234 aaPredicted RBP12.83□□□□□ -0.35
HERC6-202ENST00000273960 KCNA7Q96RP8 456 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 CDK5RAP1Q96SZ6 601 aaKnown RBP12.83□□□□□ -0.35
HERC6-202ENST00000273960 SLC25A23Q9BV35 468 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 CHID1Q9BWS9 393 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 AGPAT4Q9NRZ5 378 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 DKK3Q9UBP4 350 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 VTI1BQ9UEU0 232 aa12.83□□□□□ -0.35
HERC6-202ENST00000273960 MEN1O00255 615 aa12.83□□□□□ -0.36
HERC6-202ENST00000273960 CABYRO75952 493 aa12.83□□□□□ -0.36
HERC6-202ENST00000273960 AHSGP02765 367 aa12.83□□□□□ -0.36
HERC6-202ENST00000273960 MPOP05164 745 aa12.83□□□□□ -0.36
HERC6-202ENST00000273960 SLC35E2BP0CK96 405 aa12.83□□□□□ -0.36
HERC6-202ENST00000273960 TMBIM6P55061 237 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms