RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 PLA2G1BP04054 148 aaKnown RBP9.89□□□□□ -0.83
LRTM1-201ENST00000273286 ZNF18P17022 549 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 MC3RP41968 323 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 STK19P49842 368 aaPredicted RBP9.89□□□□□ -0.83
LRTM1-201ENST00000273286 MORC3Q14149 939 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 SHBQ15464 509 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 ACCSLQ4AC99 568 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 CXorf57Q6NSI4 855 aaKnown RBP9.89□□□□□ -0.83
LRTM1-201ENST00000273286 DENND1BQ6P3S1 775 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 TRIM65Q6PJ69 517 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 ZSCAN30Q86W11 494 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 EID2Q8N6I1 236 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 LSM14AQ8ND56 463 aaKnown RBP9.89□□□□□ -0.83
LRTM1-201ENST00000273286 C1orf131Q8NDD1 294 aaKnown RBP9.89□□□□□ -0.83
LRTM1-201ENST00000273286 RFFLQ8WZ73 363 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 LRIG1Q96JA1 1093 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 SMG1Q96Q15 3661 aaKnown RBP9.89□□□□□ -0.83
LRTM1-201ENST00000273286 FEM1AQ9BSK4 669 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 TGIF2Q9GZN2 237 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 ARHGAP20Q9P2F6 1191 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 XPO7Q9UIA9 1087 aaKnown RBP9.89□□□□□ -0.83
LRTM1-201ENST00000273286 VPS28Q9UK41 221 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 STAP1Q9ULZ2 295 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 HS3ST2Q9Y278 367 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 TBC1D30Q9Y2I9 924 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 PMF1-BGLAPU3KQ54 211 aa9.89□□□□□ -0.83
LRTM1-201ENST00000273286 LOC400499M0QZD8 3231 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 PLK4O00444 970 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 F9P00740 461 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 ACP1P24666 158 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 CDH4P55283 916 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 DLG2Q15700 870 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 C5orf22Q49AR2 442 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 BRMS1LQ5PSV4 323 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 HES3Q5TGS1 186 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 AGBL4Q5VU57 503 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 FBXL22Q6P050 247 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 GBP6Q6ZN66 633 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 C11orf57Q6ZUT1 292 aaPredicted RBP9.88□□□□□ -0.83
LRTM1-201ENST00000273286 SLC26A9Q7LBE3 791 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 SETD3Q86TU7 594 aaPredicted RBP9.88□□□□□ -0.83
LRTM1-201ENST00000273286 DEFB106AQ8N104 65 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 SH2D3CQ8N5H7 860 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 TMIEQ8NEW7 156 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 ZNF397Q8NF99 534 aaPredicted RBP9.88□□□□□ -0.83
LRTM1-201ENST00000273286 PIP4K2CQ8TBX8 421 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 FNIP1Q8TF40 1166 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 ANAPC16Q96DE5 110 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 PPP1R16AQ96I34 528 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 PPP1R13BQ96KQ4 1090 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 SYNCQ9H7C4 482 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 USP29Q9HBJ7 922 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 DYRK4Q9NR20 520 aa9.88□□□□□ -0.83
LRTM1-201ENST00000273286 TRBV23OR9-2A0A075B6M9 112 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 CXorf51AA0A1B0GTR3 108 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 NEMP2A6NFY4 417 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 CAPN8A6NHC0 703 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 RTN2O75298 545 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 DAB1O75553 588 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 ALPPL2P10696 532 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 KRT9P35527 623 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 ACTN2P35609 894 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 EIF2S3P41091 472 aaKnown RBP9.87□□□□□ -0.83
LRTM1-201ENST00000273286 BPIFB4P59827 614 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 PPP2CBP62714 309 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 PPP2CAP67775 309 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 TARDBPQ13148 414 aaKnown RBP eCLIP9.87□□□□□ -0.83
LRTM1-201ENST00000273286 DNAJC3Q13217 504 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 EXOC3L4Q17RC7 722 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 VWA3BQ502W6 1294 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 PRAMEF14Q5SWL7 426 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 ISM2Q6H9L7 571 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 OLFML1Q6UWY5 402 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 KANSL1Q7Z3B3 1105 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 DCP2Q8IU60 420 aaKnown RBP9.87□□□□□ -0.83
LRTM1-201ENST00000273286 DCAF4L2Q8NA75 395 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 NETO2Q8NC67 525 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 SHC3Q92529 594 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 ALG14Q96F25 216 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 TSPAN17Q96FV3 270 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 CPXM1Q96SM3 734 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 VANGL2Q9ULK5 521 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 CLCA2Q9UQC9 943 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 OR51B4Q9Y5P0 310 aa9.87□□□□□ -0.83
LRTM1-201ENST00000273286 SYNJ2BP-COX16A0A087WUM0 186 aa9.86□□□□□ -0.83
LRTM1-201ENST00000273286 WNT9AO14904 365 aa9.86□□□□□ -0.83
LRTM1-201ENST00000273286 KCNH1O95259 989 aa9.86□□□□□ -0.83
LRTM1-201ENST00000273286 CALCAP01258 141 aa9.86□□□□□ -0.83
LRTM1-201ENST00000273286 HNRNPA2B1P22626 353 aaKnown RBP9.86□□□□□ -0.83
LRTM1-201ENST00000273286 MAT2AP31153 395 aaKnown RBP9.86□□□□□ -0.83
LRTM1-201ENST00000273286 AKT2P31751 481 aa9.86□□□□□ -0.83
LRTM1-201ENST00000273286 USP8P40818 1118 aa9.86□□□□□ -0.83
LRTM1-201ENST00000273286 RECQLP46063 649 aaPredicted RBP9.86□□□□□ -0.83
LRTM1-201ENST00000273286 SLC6A3Q01959 620 aa9.86□□□□□ -0.83
LRTM1-201ENST00000273286 SLC20A2Q08357 652 aa9.86□□□□□ -0.83
LRTM1-201ENST00000273286 CNTN1Q12860 1018 aa9.86□□□□□ -0.83
LRTM1-201ENST00000273286 NME3Q13232 169 aa9.86□□□□□ -0.83
LRTM1-201ENST00000273286 LRRC31Q6UY01 552 aa9.86□□□□□ -0.83
LRTM1-201ENST00000273286 ZNF783Q6ZMS7 281 aa9.86□□□□□ -0.83
LRTM1-201ENST00000273286 CIR1Q86X95 450 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms